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Q9ZI33

- RBS_BRADU

UniProt

Q9ZI33 - RBS_BRADU

Protein

Ribulose bisphosphate carboxylase small chain

Gene

cbbS

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 80 (01 Oct 2014)
      Sequence version 1 (01 May 1999)
      Previous versions | rss
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    Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity.By similarity

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.

    GO - Molecular functioni

    1. monooxygenase activity Source: UniProtKB-KW
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. reductive pentose-phosphate cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase, Monooxygenase, Oxidoreductase

    Keywords - Biological processi

    Calvin cycle, Carbon dioxide fixation

    Enzyme and pathway databases

    BioCyciBJAP224911:GJEJ-2609-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase small chain (EC:4.1.1.39)
    Short name:
    RuBisCO small subunit
    Gene namesi
    Name:cbbS
    Ordered Locus Names:blr2586
    OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
    Taxonomic identifieri224911 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000002526: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 134134Ribulose bisphosphate carboxylase small chainPRO_0000198611Add
    BLAST

    Interactioni

    Subunit structurei

    8 large chains + 8 small chains.

    Protein-protein interaction databases

    STRINGi224911.blr2586.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9ZI33.
    SMRiQ9ZI33. Positions 1-124.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO small chain family.Curated

    Phylogenomic databases

    eggNOGiCOG4451.
    HOGENOMiHOG000141331.
    KOiK01602.
    OrthoDBiEOG6RC3Q7.
    PhylomeDBiQ9ZI33.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR000894. RuBisCO_sc_dom.
    [Graphical view]
    PfamiPF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    SMARTiSM00961. RuBisCO_small. 1 hit.
    [Graphical view]
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9ZI33-1 [UniParc]FASTAAdd to Basket

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    MKLTQGCFSF LPDLTDDQIY KQVQYCLAKG WAVNIEFTDD PHPRNTYWEM    50
    WGLPMFDLQD AAGVMMELAE CRRVYGDRYI RISGFDSSPG WESVRISFLV 100
    NRPPQEAEFE LVRQEVGGRA IRYTTVRKAP AHVS 134
    Length:134
    Mass (Da):15,515
    Last modified:May 1, 1999 - v1
    Checksum:i68301DC185F479FB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF041820 Genomic DNA. Translation: AAD05387.1.
    BA000040 Genomic DNA. Translation: BAC47851.1.
    RefSeqiNP_769226.1. NC_004463.1.

    Genome annotation databases

    EnsemblBacteriaiBAC47851; BAC47851; BAC47851.
    GeneIDi1049535.
    KEGGibja:blr2586.
    PATRICi21188586. VBIBraJap65052_2552.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF041820 Genomic DNA. Translation: AAD05387.1 .
    BA000040 Genomic DNA. Translation: BAC47851.1 .
    RefSeqi NP_769226.1. NC_004463.1.

    3D structure databases

    ProteinModelPortali Q9ZI33.
    SMRi Q9ZI33. Positions 1-124.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224911.blr2586.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC47851 ; BAC47851 ; BAC47851 .
    GeneIDi 1049535.
    KEGGi bja:blr2586.
    PATRICi 21188586. VBIBraJap65052_2552.

    Phylogenomic databases

    eggNOGi COG4451.
    HOGENOMi HOG000141331.
    KOi K01602.
    OrthoDBi EOG6RC3Q7.
    PhylomeDBi Q9ZI33.

    Enzyme and pathway databases

    BioCyci BJAP224911:GJEJ-2609-MONOMER.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR000894. RuBisCO_sc_dom.
    [Graphical view ]
    Pfami PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    SMARTi SM00961. RuBisCO_small. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Bradyrhizobium japonicum RubisCO cbbL and cbbS genes."
      Horken K.M., Tabita F.R.
      Submitted (JAN-1998) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

    Entry informationi

    Entry nameiRBS_BRADU
    AccessioniPrimary (citable) accession number: Q9ZI33
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2000
    Last sequence update: May 1, 1999
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3