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Reviewed, UniProtKB/Swiss-Prot Q9ZE48 (RL28_RICPR)

Last modified November 3, 2009. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    50S ribosomal protein L28
Gene names
Name: rpmB
Ordered Locus Names: RP099
OrganismRickettsia prowazekii [Complete proteome] [HAMAP]
Taxonomic identifier782 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length97 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 979750S ribosomal protein L28 HAMAP MF_00373
PRO_0000178539

Sequences

Sequence LengthMass (Da)Tools
Q9ZE48-1 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 96889B2F4E1E28C8

FASTA9710,953
        10         20         30         40         50         60 
MSRKCELTGV GVLYGNNVSH SQRKTRRRFE PNLRSIKFRS DITDEVYRLS VNARCIRSVE 

        70         80         90 
KAGGFDAYIL KANDDILSSA ARAIKQKIIH IKAAKSL 

« Hide

References

[1]"The genome sequence of Rickettsia prowazekii and the origin of mitochondria."
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G.
Nature 396:133-140(1998) [PubMed: 9823893] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Madrid E.

Cross-references

Sequence databases

AJ235270 Genomic DNA. Translation: CAA14569.1.
PIRB71719.
RefSeqNP_220492.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID883703.
GenomeReviewsGene locus RP099 in contig AJ235269_GR.
KEGGrpr:RP099.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ9ZE48.
OMACELTGKG

Enzyme and pathway databases

BioCycRPRO272947:RP099-MON.

Family and domain databases

HAMAPMF_00373.
[Tree]
InterProIPR001383. Ribosomal_L28.
[Graphical view]
PfamPF00830. Ribosomal_L28. 1 hit.
[Graphical view]
TIGRFAMsTIGR00009. L28. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL28_RICPR
AccessionPrimary (citable) accession number: Q9ZE48
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: November 3, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

Rickettsia prowazekii

Rickettsia prowazekii (strain Madrid E): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents