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Reviewed, UniProtKB/Swiss-Prot Q9ZE47 (RL31_RICPR)

Last modified November 3, 2009. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    50S ribosomal protein L31
Gene names
Name: rpmE
Ordered Locus Names: RP100
OrganismRickettsia prowazekii [Complete proteome] [HAMAP]
Taxonomic identifier782 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length78 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Binds the 23S rRNA By similarity.

Subunit structure

Part of the 50S ribosomal subunit By similarity.

Sequence similarities

Belongs to the ribosomal protein L31P family. Type A subfamily.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 787850S ribosomal protein L31 HAMAP MF_00501
PRO_0000173155

Sequences

Sequence LengthMass (Da)Tools
Q9ZE47-1 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 0CC468EB22855F17

FASTA788,811
        10         20         30         40         50         60 
MKNGIHPEYK KLLIKVGSNI FETMSTHPIG EILMDVDFRK HPAWNKDSGN VVNQSNKSVS 

        70 
DFNKRFAGLS FDSKKEAS 

« Hide

References

[1]"The genome sequence of Rickettsia prowazekii and the origin of mitochondria."
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G.
Nature 396:133-140(1998) [PubMed: 9823893] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Madrid E.

Cross-references

Sequence databases

AJ235270 Genomic DNA. Translation: CAA14570.1.
PIRC71719.
RefSeqNP_220493.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID883704.
GenomeReviewsGene locus RP100 in contig AJ235269_GR.
KEGGrpr:RP100.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ9ZE47.
OMANIFETMS

Enzyme and pathway databases

BioCycRPRO272947:RP100-MON.

Family and domain databases

HAMAPMF_00501.
[Tree]
InterProIPR002150. Ribosomal_L31.
[Graphical view]
TIGRFAMsTIGR00105. L31. 1 hit.
PROSITEPS01143. RIBOSOMAL_L31. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL31_RICPR
AccessionPrimary (citable) accession number: Q9ZE47
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: November 3, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

Rickettsia prowazekii

Rickettsia prowazekii (strain Madrid E): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents