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Q9ZDS2 (CYCM_RICPR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Cytochrome c homolog
Gene names
Name:cycM
Ordered Locus Names:RP253
OrganismRickettsia prowazekii (strain Madrid E) [Reference proteome] [HAMAP]
Taxonomic identifier272947 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length175 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in electron transfer from bc1 complex to aa3 By similarity.

Subcellular location

Cell membrane; Single-pass type II membrane protein By similarity.

Post-translational modification

Binds 1 heme group per subunit By similarity.

Sequence similarities

Belongs to the cytochrome c family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 175175Cytochrome c homolog
PRO_0000288758

Regions

Topological domain1 – 88Cytoplasmic Potential
Transmembrane9 – 2921Helical; Signal-anchor; Potential
Topological domain30 – 175146Periplasmic Potential

Sites

Metal binding881Iron (heme axial ligand) By similarity
Metal binding1501Iron (heme axial ligand) By similarity
Binding site841Heme (covalent) By similarity
Binding site871Heme (covalent) By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9ZDS2 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 5E3422344225017D

FASTA17519,286
        10         20         30         40         50         60 
MTGKELNKIV AAILFASLIA MIVGFIANIL YKPNLHVLHR GYSIAIQKSS SNESATVIAQ 

        70         80         90        100        110        120 
ESVNIQELMK TANANHGREI AKKCLMCHSL DKDGPNKLGP HLWNIVGRPK ASITDYKYSF 

       130        140        150        160        170 
AISKLGGVWD DENLFAFLHK PSSYAPGTKM SFAGISKPQD IADVILFLKN YVHDQ 

« Hide

References

[1]"The genome sequence of Rickettsia prowazekii and the origin of mitochondria."
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G.
Nature 396:133-140(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Madrid E.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ235271 Genomic DNA. Translation: CAA14715.1.
PIRA71680.
RefSeqNP_220638.1. NC_000963.1.

3D structure databases

ProteinModelPortalQ9ZDS2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272947.RP253.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAA14715; CAA14715; CAA14715.
GeneID883146.
KEGGrpr:RP253.
PATRIC17901266. VBIRicPro72556_0260.

Phylogenomic databases

eggNOGCOG3474.
HOGENOMHOG000009763.
KOK08738.
OMANYSKAML.
OrthoDBEOG6MM1PX.

Family and domain databases

Gene3D1.10.760.10. 1 hit.
InterProIPR009056. Cyt_c-like_dom.
IPR002327. Cyt_c_1A/1B.
IPR003088. Cyt_c_dom.
[Graphical view]
PANTHERPTHR11961. PTHR11961. 1 hit.
PfamPF00034. Cytochrom_C. 1 hit.
[Graphical view]
PRINTSPR00604. CYTCHRMECIAB.
SUPFAMSSF46626. SSF46626. 1 hit.
PROSITEPS51007. CYTC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCYCM_RICPR
AccessionPrimary (citable) accession number: Q9ZDS2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 1, 1999
Last modified: May 14, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia prowazekii

Rickettsia prowazekii (strain Madrid E): entries and gene names