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Protein

RlpA-like protein

Gene

rlpA

Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
RlpA-like protein
Gene namesi
Name:rlpA
Ordered Locus Names:RP390
OrganismiRickettsia prowazekii (strain Madrid E)
Taxonomic identifieri272947 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000002480: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 320320RlpA-like proteinPRO_0000190006Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272947.RP390.

Structurei

3D structure databases

ProteinModelPortaliQ9ZDE1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RlpA family.Curated

Phylogenomic databases

eggNOGiCOG0797.
HOGENOMiHOG000254768.
KOiK03642.
OMAiDGFHGKK.
OrthoDBiEOG6X3W9K.

Family and domain databases

InterProiIPR009009. RlpA-like_DPBB.
IPR022438. RPE5.
IPR012997. RplA_bac.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
TIGRFAMsiTIGR00413. rlpA. 1 hit.
TIGR03776. RPE5. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZDE1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIIMRNYKFK LEPLKQCQEA FKRYTVHSTA LYIIALQANW SRRLIYKLSL
60 70 80 90 100
YFCKIKNCYT TFKFEQSNRF IITKAERIIK IQHLIRFKDI VNNFISLINI
110 120 130 140 150
LLVLIFCINL SGCNASKKLS YSNKYSYKEL SKDDPHNLTY IGHYKVGKNY
160 170 180 190 200
KIKGKIYKPH TPKYFTETGY ASWYGGRKDG FHGKTTANGD RFNRNLLTAA
210 220 230 240 250
HKTLPLPCLV KVTNKVNNKS VILMVNDRGP FKKNRIIDVS QKAAEILAFK
260 270 280 290 300
NQGVTKVRIE YLPNETEKFL KKINLKKPEN KTFAKNHKKS LFTQITKNNQ
310 320
CSINCHIKLV NLKYKLAVNP
Length:320
Mass (Da):37,353
Last modified:May 1, 1999 - v1
Checksum:iDBBB0B1EF6B8B34A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235271 Genomic DNA. Translation: CAA14847.1.
PIRiE71696.
RefSeqiNP_220771.1. NC_000963.1.

Genome annotation databases

EnsemblBacteriaiCAA14847; CAA14847; CAA14847.
GeneIDi883452.
KEGGirpr:RP390.
PATRICi17901559. VBIRicPro72556_0402.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235271 Genomic DNA. Translation: CAA14847.1.
PIRiE71696.
RefSeqiNP_220771.1. NC_000963.1.

3D structure databases

ProteinModelPortaliQ9ZDE1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272947.RP390.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA14847; CAA14847; CAA14847.
GeneIDi883452.
KEGGirpr:RP390.
PATRICi17901559. VBIRicPro72556_0402.

Phylogenomic databases

eggNOGiCOG0797.
HOGENOMiHOG000254768.
KOiK03642.
OMAiDGFHGKK.
OrthoDBiEOG6X3W9K.

Family and domain databases

InterProiIPR009009. RlpA-like_DPBB.
IPR022438. RPE5.
IPR012997. RplA_bac.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
TIGRFAMsiTIGR00413. rlpA. 1 hit.
TIGR03776. RPE5. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Madrid E.

Entry informationi

Entry nameiRLPA_RICPR
AccessioniPrimary (citable) accession number: Q9ZDE1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 5, 2002
Last sequence update: May 1, 1999
Last modified: January 7, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Rickettsia prowazekii
    Rickettsia prowazekii (strain Madrid E): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.