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Q9ZD90

- IDI2_RICPR

UniProt

Q9ZD90 - IDI2_RICPR

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Protein
Isopentenyl-diphosphate delta-isomerase
Gene
fni, RP452
Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) By similarity.UniRule annotation

Catalytic activityi

Isopentenyl diphosphate = dimethylallyl diphosphate.UniRule annotation

Cofactori

FMN By similarity.UniRule annotation
NADPH By similarity.UniRule annotation

GO - Molecular functioni

  1. FMN binding Source: InterPro
  2. isopentenyl-diphosphate delta-isomerase activity Source: UniProtKB-EC
  3. oxidoreductase activity Source: InterPro

GO - Biological processi

  1. isoprenoid biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Isoprene biosynthesis

Keywords - Ligandi

Flavoprotein, FMN, NADP

Names & Taxonomyi

Protein namesi
Recommended name:
Isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Short name:
IPP isomerase
Alternative name(s):
Isopentenyl pyrophosphate isomerase
Gene namesi
Name:fni
Ordered Locus Names:RP452
OrganismiRickettsia prowazekii (strain Madrid E)
Taxonomic identifieri272947 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000002480: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 342342Isopentenyl-diphosphate delta-isomeraseUniRule annotation
PRO_0000134419Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272947.RP452.

Structurei

3D structure databases

ProteinModelPortaliQ9ZD90.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1304.
HOGENOMiHOG000072126.
KOiK01823.
OMAiFEFPFYI.
OrthoDBiEOG62C9GJ.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
HAMAPiMF_00354. Idi_2.
InterProiIPR013785. Aldolase_TIM.
IPR000262. FMN-dep_DH.
IPR011179. IPdP_isomerase.
[Graphical view]
PANTHERiPTHR10578:SF3. PTHR10578:SF3. 1 hit.
PfamiPF01070. FMN_dh. 1 hit.
[Graphical view]
PIRSFiPIRSF003314. IPP_isomerase. 1 hit.
TIGRFAMsiTIGR02151. IPP_isom_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZD90-1 [UniParc]FASTAAdd to Basket

« Hide

MPKEQNLDIE RKQEHIEINL KQNVNSTLKS GLESIKFIHN ALPEINYDSI    50
DTTTTFLGKD MKAPILISSM TGGTARARDI NYRLAQAAQK SGIAMGLGSM 100
RILLTKPDTI KTFTVRHVAP DIPLLANIGA VQLNYGVTPK ECQYLIDTIK 150
ADALILHLNV LHELTQPEGN KNWENLLPKI KEVINYLSVP VIVKEVGYGL 200
SKQVAKKLIK AGVKVLDIAG SGGTSWSQVE AYRAKNSMQN RIASSFINWG 250
ITTLDSLKML QEISKDITII ASGGLQSGID GAKAIRMGAN IFGLAGKLLK 300
AADIAESLVL EEIQVIIEQL KITMLCTGSC TLKDLAKAEI MW 342
Length:342
Mass (Da):37,364
Last modified:May 1, 1999 - v1
Checksum:iFE452A843CA1B950
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ235271 Genomic DNA. Translation: CAA14909.1.
PIRiC71704.
RefSeqiNP_220833.1. NC_000963.1.

Genome annotation databases

EnsemblBacteriaiCAA14909; CAA14909; CAA14909.
GeneIDi883361.
KEGGirpr:RP452.
PATRICi17901685. VBIRicPro72556_0465.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ235271 Genomic DNA. Translation: CAA14909.1 .
PIRi C71704.
RefSeqi NP_220833.1. NC_000963.1.

3D structure databases

ProteinModelPortali Q9ZD90.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272947.RP452.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAA14909 ; CAA14909 ; CAA14909 .
GeneIDi 883361.
KEGGi rpr:RP452.
PATRICi 17901685. VBIRicPro72556_0465.

Phylogenomic databases

eggNOGi COG1304.
HOGENOMi HOG000072126.
KOi K01823.
OMAi FEFPFYI.
OrthoDBi EOG62C9GJ.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
HAMAPi MF_00354. Idi_2.
InterProi IPR013785. Aldolase_TIM.
IPR000262. FMN-dep_DH.
IPR011179. IPdP_isomerase.
[Graphical view ]
PANTHERi PTHR10578:SF3. PTHR10578:SF3. 1 hit.
Pfami PF01070. FMN_dh. 1 hit.
[Graphical view ]
PIRSFi PIRSF003314. IPP_isomerase. 1 hit.
TIGRFAMsi TIGR02151. IPP_isom_2. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Madrid E.

Entry informationi

Entry nameiIDI2_RICPR
AccessioniPrimary (citable) accession number: Q9ZD90
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: May 1, 1999
Last modified: May 14, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Rickettsia prowazekii
    Rickettsia prowazekii (strain Madrid E): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi