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Protein

50S ribosomal protein L25

Gene

rplY

Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciRPRO272947:G1GT0-606-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L25UniRule annotation
Alternative name(s):
General stress protein CTCUniRule annotation
Gene namesi
Name:rplYUniRule annotation
Synonyms:ctcUniRule annotation
Ordered Locus Names:RP606
OrganismiRickettsia prowazekii (strain Madrid E)
Taxonomic identifieri272947 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001815881 – 20350S ribosomal protein L25Add BLAST203

Proteomic databases

PRIDEiQ9ZCV3

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.UniRule annotation

Protein-protein interaction databases

STRINGi272947.RP606

Structurei

3D structure databases

ProteinModelPortaliQ9ZCV3
SMRiQ9ZCV3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KW6 Bacteria
COG1825 LUCA
HOGENOMiHOG000214907
KOiK02897
OMAiGDSIHIS

Family and domain databases

CDDicd00495 Ribosomal_L25_TL5_CTC, 1 hit
Gene3Di2.170.120.20, 1 hit
2.40.240.10, 1 hit
HAMAPiMF_01336 Ribosomal_L25, 1 hit
MF_01334 Ribosomal_L25_CTC, 1 hit
InterProiView protein in InterPro
IPR020056 Rbsml_L25/Gln-tRNA_synth_N
IPR029751 Ribosomal_L25
IPR011035 Ribosomal_L25/Gln-tRNA_synth
IPR020057 Ribosomal_L25_b-dom
IPR037121 Ribosomal_L25_C
IPR001021 Ribosomal_L25_long
IPR020055 Ribosomal_L25_short
PfamiView protein in Pfam
PF01386 Ribosomal_L25p, 1 hit
PF14693 Ribosomal_TL5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012503 Ribosomal_L25, 1 hit
SUPFAMiSSF50715 SSF50715, 1 hit
TIGRFAMsiTIGR00731 bL25_bact_ctc, 1 hit

Sequencei

Sequence statusi: Complete.

Q9ZCV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGILELEAK SRTEFGTGAA RALRREGRVP AIIYGAGKTP ISISLKEKEI
60 70 80 90 100
TKYYRKPAFI SQLINLTIDK KQYKVLPKAV ELHPVTDIVR HVDFVFLEAK
110 120 130 140 150
TQKMEVPIVY EGKERALGVK RGGYFNIIKR RVILLCDVNN IPRNVTIDVT
160 170 180 190 200
NMPIGTSLKS SQVELPKGCS FITKKEFVLA TIIGRRGVKT EIEGEQEVAE

AIQ
Length:203
Mass (Da):22,728
Last modified:May 1, 1999 - v1
Checksum:iD01871AD009EDA03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235272 Genomic DNA Translation: CAA15050.1
PIRiH71665
RefSeqiNP_220974.1, NC_000963.1
WP_004597954.1, NC_000963.1

Genome annotation databases

EnsemblBacteriaiCAA15050; CAA15050; CAA15050
GeneIDi883776
KEGGirpr:RP606
PATRICifig|272947.5.peg.625

Similar proteinsi

Entry informationi

Entry nameiRL25_RICPR
AccessioniPrimary (citable) accession number: Q9ZCV3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: May 23, 2018
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia prowazekii
    Rickettsia prowazekii (strain Madrid E): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

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