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Q9ZCS8 (RS11_RICPR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S11
Gene names
Name:rpsK
Ordered Locus Names:RP636
OrganismRickettsia prowazekii (strain Madrid E) [Reference proteome] [HAMAP]
Taxonomic identifier272947 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length127 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome By similarity. HAMAP-Rule MF_01310

Subunit structure

Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3 By similarity.

Sequence similarities

Belongs to the ribosomal protein S11P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12712730S ribosomal protein S11 HAMAP-Rule MF_01310
PRO_0000123210

Sequences

Sequence LengthMass (Da)Tools
Q9ZCS8 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: BED96964C891616C

FASTA12713,583
        10         20         30         40         50         60 
MNQTIKVKKK KKTITLGVVH IRASFNNTIV TFTDIQGNTI SSASAGGNGF KGARKATPYA 

        70         80         90        100        110        120 
AQVTIDKASE KAKECGLKTI SIRIGGPGAQ RESAMRALFG QNFVVTSILD VSSIAHNGVR 


PPKRRRV 

« Hide

References

[1]"The genome sequence of Rickettsia prowazekii and the origin of mitochondria."
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G.
Nature 396:133-140(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Madrid E.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ235272 Genomic DNA. Translation: CAA15076.1.
PIRB71669.
RefSeqNP_221000.1. NC_000963.1.

3D structure databases

ProteinModelPortalQ9ZCS8.
SMRQ9ZCS8. Positions 11-127.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272947.RP636.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAA15076; CAA15076; CAA15076.
GeneID883982.
KEGGrpr:RP636.
PATRIC17902099. VBIRicPro72556_0658.

Phylogenomic databases

eggNOGCOG0100.
HOGENOMHOG000111597.
KOK02948.
OMAPEIEMAC.
OrthoDBEOG6ZSPF3.

Family and domain databases

Gene3D3.30.420.80. 1 hit.
HAMAPMF_01310. Ribosomal_S11.
InterProIPR001971. Ribosomal_S11.
IPR019981. Ribosomal_S11_bac-type.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERPTHR11759. PTHR11759. 1 hit.
PfamPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsTIGR03632. bact_S11. 1 hit.
PROSITEPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS11_RICPR
AccessionPrimary (citable) accession number: Q9ZCS8
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia prowazekii

Rickettsia prowazekii (strain Madrid E): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries