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Q9ZCQ7

- RL23_RICPR

UniProt

Q9ZCQ7 - RL23_RICPR

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Protein
50S ribosomal protein L23
Gene
rplW, RP657
Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome By similarity.UniRule annotation

GO - Molecular functioni

  1. nucleotide binding Source: InterPro
  2. rRNA binding Source: UniProtKB-HAMAP
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L23
Gene namesi
Name:rplW
Ordered Locus Names:RP657
OrganismiRickettsia prowazekii (strain Madrid E)
Taxonomic identifieri272947 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000002480: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 989850S ribosomal protein L23UniRule annotation
PRO_0000129422Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome By similarity.

Protein-protein interaction databases

STRINGi272947.RP657.

Structurei

3D structure databases

ProteinModelPortaliQ9ZCQ7.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0089.
HOGENOMiHOG000231366.
KOiK02892.
OMAiGKTKRMG.
OrthoDBiEOG6DRPMV.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_01369_B. Ribosomal_L23_B.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamiPF00276. Ribosomal_L23. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZCQ7-1 [UniParc]FASTAAdd to Basket

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MSVYKYYDLI RKPIITEKTT SISEQNKYTF YVNKFAKKLS LKRAIEAIFK   50
VKVKKVNILN IKGKKKRFKG IIGTQINRKK AIVTLEKDHN IDYAGGIK 98
Length:98
Mass (Da):11,411
Last modified:May 1, 1999 - v1
Checksum:i22F5448F3DE2BB0F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ235272 Genomic DNA. Translation: CAA15097.1.
PIRiG71671.
RefSeqiNP_221021.1. NC_000963.1.

Genome annotation databases

EnsemblBacteriaiCAA15097; CAA15097; CAA15097.
GeneIDi883814.
KEGGirpr:RP657.
PATRICi17902141. VBIRicPro72556_0679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ235272 Genomic DNA. Translation: CAA15097.1 .
PIRi G71671.
RefSeqi NP_221021.1. NC_000963.1.

3D structure databases

ProteinModelPortali Q9ZCQ7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272947.RP657.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAA15097 ; CAA15097 ; CAA15097 .
GeneIDi 883814.
KEGGi rpr:RP657.
PATRICi 17902141. VBIRicPro72556_0679.

Phylogenomic databases

eggNOGi COG0089.
HOGENOMi HOG000231366.
KOi K02892.
OMAi GKTKRMG.
OrthoDBi EOG6DRPMV.

Family and domain databases

Gene3Di 3.30.70.330. 1 hit.
HAMAPi MF_01369_B. Ribosomal_L23_B.
InterProi IPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view ]
Pfami PF00276. Ribosomal_L23. 1 hit.
[Graphical view ]
SUPFAMi SSF54189. SSF54189. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Madrid E.

Entry informationi

Entry nameiRL23_RICPR
AccessioniPrimary (citable) accession number: Q9ZCQ7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: May 14, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia prowazekii
    Rickettsia prowazekii (strain Madrid E): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi