Q9ZCP9 (CSPA_RICPR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Cold shock-like protein CspA

Gene names

Name:	cspA
Ordered Locus Names:	RP670

Organism

Rickettsia prowazekii (strain Madrid E) [Reference proteome] [HAMAP]

Taxonomic identifier

272947 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group › Rickettsia prowazekii

Protein attributes

Sequence length	70 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cytoplasm By similarity.
Sequence similarities	Contains 1 CSD (cold-shock) domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	Cytoplasm
Ligand	DNA-binding
Molecular function	Activator
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 70	70	Cold shock-like protein CspA		PRO_0000100324
Regions
	Domain	7 – 67	61	CSD

Sequences

	Sequence		Length	Mass (Da)
	Q9ZCP9 [UniParc]. Last modified May 1, 1999. Version 1. Checksum: F49FBF2FB344903E	FASTA	70	7,785
	10 20 30 40 50 60 MATNIVGKVK WYNSTKNFGF IEQDNGGKDV FVHKSAIDAA GLHSLEEGQE VIFDIEEKQG 70 KAYAVNLRVK

References

[1]

"The genome sequence of Rickettsia prowazekii and the origin of mitochondria." Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G. Nature 396:133-140(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Madrid E.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ235272 Genomic DNA. Translation: CAA15108.1.
PIR	B71673.
RefSeq	NP_221032.1. NC_000963.1.
3D structure databases
ProteinModelPortal	Q9ZCP9.
ModBase	Search...
Protein-protein interaction databases
STRING	272947.RP670.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAA15108; CAA15108; CAA15108.
GeneID	883690.
KEGG	rpr:RP670.
PATRIC	17902167. VBIRicPro72556_0690.
Phylogenomic databases
eggNOG	COG1278.
HOGENOM	HOG000070673.
KO	K03704.
OMA	SYDVLQD.
ProtClustDB	CLSK871024.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR019844. Cold-shock_CS. IPR012156. Cold_shock_CspA. IPR011129. Cold_shock_prot. IPR002059. CSP_DNA-bd. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF00313. CSD. 1 hit. [Graphical view]
PIRSF	PIRSF002599. Cold_shock_A. 1 hit.
PRINTS	PR00050. COLDSHOCK.
SMART	SM00357. CSP. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00352. COLD_SHOCK. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

CSPA_RICPR

Accession

Primary (citable) accession number: Q9ZCP9

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2000
Last sequence update:	May 1, 1999
Last modified:	May 1, 2013
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program