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Protein
Submitted name:

CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMF (CcmF)

Gene

RP703

Organism
Rickettsia prowazekii (strain Madrid E)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMF (CcmF)Imported
Gene namesi
Ordered Locus Names:RP703Imported
OrganismiRickettsia prowazekii (strain Madrid E)Imported
Taxonomic identifieri272947 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi
  • UP000002480 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 27HelicalSequence analysisAdd BLAST22
Transmembranei58 – 79HelicalSequence analysisAdd BLAST22
Transmembranei113 – 131HelicalSequence analysisAdd BLAST19
Transmembranei138 – 157HelicalSequence analysisAdd BLAST20
Transmembranei192 – 214HelicalSequence analysisAdd BLAST23
Transmembranei242 – 265HelicalSequence analysisAdd BLAST24
Transmembranei285 – 302HelicalSequence analysisAdd BLAST18
Transmembranei309 – 327HelicalSequence analysisAdd BLAST19
Transmembranei347 – 366HelicalSequence analysisAdd BLAST20
Transmembranei403 – 425HelicalSequence analysisAdd BLAST23
Transmembranei437 – 457HelicalSequence analysisAdd BLAST21
Transmembranei464 – 480HelicalSequence analysisAdd BLAST17
Transmembranei486 – 507HelicalSequence analysisAdd BLAST22
Transmembranei519 – 540HelicalSequence analysisAdd BLAST22
Transmembranei647 – 665HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272947.RP703.

Structurei

3D structure databases

ProteinModelPortaliQ9ZCM1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini106 – 331Cytochrom_C_asmInterPro annotationAdd BLAST226
Domaini386 – 665CcmF_CInterPro annotationAdd BLAST280

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105DA4. Bacteria.
COG1138. LUCA.
HOGENOMiHOG000274659.
KOiK02198.
OMAiPFYIAAS.

Family and domain databases

InterProiIPR032523. CcmF_C.
IPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 3 hits.
PfamiPF16327. CcmF_C. 1 hit.
PF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.

Sequencei

Sequence statusi: Complete.

Q9ZCM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKIGNFLLL TTMCLSGILT LLIIPWLDYL IKKKHRNNIC LKFFPWIPCT
60 70 80 90 100
SQVMTQAITF YASSLCSIFA FCTLVYAFIT SDFSVQNVFL HSSTLKPLIY
110 120 130 140 150
KISGSWSSHE GSMLLWFCLL QIVSCCYIFC LEDKMLKFSS IIILSAIQLL
160 170 180 190 200
FSSFIYFTSN PFHMFSFVPK EGLGLNPMLQ DIALSIHPPL LYLGYVSYAV
210 220 230 240 250
PFTIVCAIFL IAVISRLDNN LPGYFTGYKI TQLSDRITSI RLLKIFAGCG
260 270 280 290 300
ILFTTIGISL GSWWAYRELN WGGLWFFDPV ENISLFPWLS GIMLHHSIIV
310 320 330 340 350
TTKTNRMQHW TIILSIITFL LVIFSTFLVR SGFINSIHAF AFSSERWIYL
360 370 380 390 400
LVILCIIGIG GLYVIIRLNN CSIEKTIYNT FNWNTHSNCN MTIKEKAILI
410 420 430 440 450
GNIFFLFSLI ILICATLYPT IYALFNDKPI IINEEFFIKN FIIFVIPILC
460 470 480 490 500
TIGLFTTNSS IKKHIIMLML SLIITYFILL NIKFSVISIL TIMTSIFLML
510 520 530 540 550
HNVHYLLVKT NYFRNSLKAS STSMILGHFG VALIAFSITM NSLLQSEMDF
560 570 580 590 600
IGEVGTSKTF NAFKVTLQNI KFAQGKNYYR QIAEFWLEDH KNNITILKPE
610 620 630 640 650
NRFYIIEQKL SQESDIHSYL LYDLYAVLSN IDGKIIHAKI YYKPMMSFIW
660 670
IGVILTTAGF VIALIRKNSY
Length:670
Mass (Da):76,848
Last modified:May 1, 1999 - v1
Checksum:i2703A1AC44F9EBED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235273 Genomic DNA. Translation: CAA15139.1.
PIRiC71630.
RefSeqiNP_221063.1. NC_000963.1.
WP_004598889.1. NC_000963.1.

Genome annotation databases

EnsemblBacteriaiCAA15139; CAA15139; CAA15139.
GeneIDi883707.
KEGGirpr:RP703.
PATRICi17902239. VBIRicPro72556_0724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235273 Genomic DNA. Translation: CAA15139.1.
PIRiC71630.
RefSeqiNP_221063.1. NC_000963.1.
WP_004598889.1. NC_000963.1.

3D structure databases

ProteinModelPortaliQ9ZCM1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272947.RP703.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA15139; CAA15139; CAA15139.
GeneIDi883707.
KEGGirpr:RP703.
PATRICi17902239. VBIRicPro72556_0724.

Phylogenomic databases

eggNOGiENOG4105DA4. Bacteria.
COG1138. LUCA.
HOGENOMiHOG000274659.
KOiK02198.
OMAiPFYIAAS.

Family and domain databases

InterProiIPR032523. CcmF_C.
IPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 3 hits.
PfamiPF16327. CcmF_C. 1 hit.
PF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9ZCM1_RICPR
AccessioniPrimary (citable) accession number: Q9ZCM1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: September 7, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.