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Q9ZCB1

- SYGB_RICPR

UniProt

Q9ZCB1 - SYGB_RICPR

Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 2 (01 Dec 2000)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW
    3. glycine-tRNA ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: InterPro
    2. glycyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycine--tRNA ligase beta subunit (EC:6.1.1.14)
    Alternative name(s):
    Glycyl-tRNA synthetase beta subunit
    Short name:
    GlyRS
    Gene namesi
    Name:glyS
    Ordered Locus Names:RP849
    OrganismiRickettsia prowazekii (strain Madrid E)
    Taxonomic identifieri272947 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000002480: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 665665Glycine--tRNA ligase beta subunitPRO_0000072924Add
    BLAST

    Interactioni

    Subunit structurei

    Tetramer of two alpha and two beta subunits.By similarity

    Protein-protein interaction databases

    STRINGi272947.RP849.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9ZCB1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0751.
    HOGENOMiHOG000264304.
    KOiK01879.
    OrthoDBiEOG661H9S.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    HAMAPiMF_00255. Gly_tRNA_synth_beta.
    InterProiIPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PfamiPF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view]
    PRINTSiPR01045. TRNASYNTHGB.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00211. glyS. 1 hit.
    PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9ZCB1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVSELLLELF SEEIPAFMQK NAEEGYLKIF TKIFEENEIF AKVQVFAGPR    50
    RITLHATHVP KVILPKEEEI KGPSIEAPEI AINGFCKAHN VSKLDLSTKL 100
    RNNKLYYFFV KKTKERETKE ILPKIIIDAI NKYSWTKSMF WGCYKIKWIR 150
    PLRNILCIFD GEILPLRFGH LSTNNITYGH RLTNNKKLEI IDFENYRNKL 200
    LENNVILERL KREEIIKVGL LELANAQNLN IKQDVCLIEE VTGLSEFPIV 250
    LLGKIPQKFL ELPEEVIVSV MRTHQKYFCL FDKNGSFAPY FLFVINGRFV 300
    NTELIIQGNE KVLSARLADA LYFYKNDIAK TLESRLDKLK SVIFHTKLGS 350
    LKEKVDRITD ICRYIAPDNI DLIMAAKLCK SDLVSDMVGE FPDLQGIMGY 400
    YYAKHEELNE EVAKAIRDHY KPQGLNDNVP SGNATLLALA DKLDSLVGLI 450
    IVGETPNGSG DPYALRRQAL GIIRIIIENK LEINFINLIS FSVSLYKVSS 500
    NSHLDSVISF FEERAKFYFK NDYDITLINA VLDLNLVDTK FKLDTLKEFL 550
    VQDVGKQLLN AYKRVSNIMG NQKITGLVDA SLFSTQYEKE LFEVIQKISQ 600
    QIIVIIANKD YQKALNLLSS LLKPITSFFD NVLVNDSDPK IAQNRLSLLQ 650
    NTCEVFDKVA KFCRL 665
    Length:665
    Mass (Da):76,216
    Last modified:December 1, 2000 - v2
    Checksum:iA193D931CE7463F5
    GO

    Sequence cautioni

    The sequence CAA15273.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ235273 Genomic DNA. Translation: CAA15273.1. Different initiation.
    PIRiA71647.
    RefSeqiNP_221197.2. NC_000963.1.

    Genome annotation databases

    EnsemblBacteriaiCAA15273; CAA15273; CAA15273.
    GeneIDi883343.
    KEGGirpr:RP849.
    PATRICi17902574. VBIRicPro72556_0887.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ235273 Genomic DNA. Translation: CAA15273.1 . Different initiation.
    PIRi A71647.
    RefSeqi NP_221197.2. NC_000963.1.

    3D structure databases

    ProteinModelPortali Q9ZCB1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272947.RP849.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAA15273 ; CAA15273 ; CAA15273 .
    GeneIDi 883343.
    KEGGi rpr:RP849.
    PATRICi 17902574. VBIRicPro72556_0887.

    Phylogenomic databases

    eggNOGi COG0751.
    HOGENOMi HOG000264304.
    KOi K01879.
    OrthoDBi EOG661H9S.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    HAMAPi MF_00255. Gly_tRNA_synth_beta.
    InterProi IPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    Pfami PF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view ]
    PRINTSi PR01045. TRNASYNTHGB.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00211. glyS. 1 hit.
    PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Madrid E.

    Entry informationi

    Entry nameiSYGB_RICPR
    AccessioniPrimary (citable) accession number: Q9ZCB1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2000
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 82 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. Rickettsia prowazekii
      Rickettsia prowazekii (strain Madrid E): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3