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Protein

UPF0093 membrane protein RP883

Gene

RP883

Organism
Rickettsia prowazekii (strain Madrid E)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0093 membrane protein RP883
Gene namesi
Ordered Locus Names:RP883
OrganismiRickettsia prowazekii (strain Madrid E)
Taxonomic identifieri272947 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000002480 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2621HelicalSequence AnalysisAdd
BLAST
Transmembranei61 – 8121HelicalSequence AnalysisAdd
BLAST
Transmembranei83 – 10321HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 145145UPF0093 membrane protein RP883PRO_0000217661Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272947.RP883.

Structurei

3D structure databases

ProteinModelPortaliQ9ZC85.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0093 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1981.
HOGENOMiHOG000219492.
KOiK08973.
OMAiQGWMHAK.
OrthoDBiEOG67DPNK.

Family and domain databases

InterProiIPR014351. CHP00701.
IPR005265. UPF0093.
[Graphical view]
PfamiPF03653. UPF0093. 1 hit.
[Graphical view]
PIRSFiPIRSF004638. UCP004638. 1 hit.
TIGRFAMsiTIGR00701. TIGR00701. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZC85-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESYYLWFKS AHLISAICWM AGLLYLPRIY VYHTKAKIGS ELDSTLQVME
60 70 80 90 100
LKLLRFIMNP AMISTFIFGL INAHIYGFVA LDTWFQFKMF AVLILVIFHG
110 120 130 140
LLARWRKDFA KGKNVHSKKF YRIVNEIPAI CMVIAVIMVI VKPFD
Length:145
Mass (Da):16,915
Last modified:May 1, 1999 - v1
Checksum:i8808506DA34F9612
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235273 Genomic DNA. Translation: CAA15305.1.
PIRiA71651.
RefSeqiNP_221229.1. NC_000963.1.
WP_004599693.1. NC_000963.1.

Genome annotation databases

EnsemblBacteriaiCAA15305; CAA15305; CAA15305.
GeneIDi883426.
KEGGirpr:RP883.
PATRICi17902648. VBIRicPro72556_0923.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ235273 Genomic DNA. Translation: CAA15305.1.
PIRiA71651.
RefSeqiNP_221229.1. NC_000963.1.
WP_004599693.1. NC_000963.1.

3D structure databases

ProteinModelPortaliQ9ZC85.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272947.RP883.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA15305; CAA15305; CAA15305.
GeneIDi883426.
KEGGirpr:RP883.
PATRICi17902648. VBIRicPro72556_0923.

Phylogenomic databases

eggNOGiCOG1981.
HOGENOMiHOG000219492.
KOiK08973.
OMAiQGWMHAK.
OrthoDBiEOG67DPNK.

Family and domain databases

InterProiIPR014351. CHP00701.
IPR005265. UPF0093.
[Graphical view]
PfamiPF03653. UPF0093. 1 hit.
[Graphical view]
PIRSFiPIRSF004638. UCP004638. 1 hit.
TIGRFAMsiTIGR00701. TIGR00701. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Madrid E.

Entry informationi

Entry nameiY883_RICPR
AccessioniPrimary (citable) accession number: Q9ZC85
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: May 27, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Rickettsia prowazekii
    Rickettsia prowazekii (strain Madrid E): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.