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Protein

Probable xylitol oxidase

Gene

xyoA

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol.By similarity

Catalytic activityi

An alditol + O2 = an aldose + H2O2.

Cofactori

FADBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein

Enzyme and pathway databases

BRENDAi1.1.3.41. 5998.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable xylitol oxidase (EC:1.1.3.41)
Alternative name(s):
Alditol oxidase
Gene namesi
Name:xyoA
Ordered Locus Names:SCO6147
ORF Names:SC1A9.11c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 418418Probable xylitol oxidasePRO_0000128174Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei46 – 461Pros-8alpha-FAD histidine

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6147.

Structurei

Secondary structure

1
418
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi9 – 124Combined sources
Helixi26 – 3510Combined sources
Beta strandi37 – 415Combined sources
Helixi50 – 523Combined sources
Beta strandi59 – 613Combined sources
Beta strandi70 – 734Combined sources
Turni74 – 774Combined sources
Beta strandi78 – 825Combined sources
Helixi87 – 9610Combined sources
Beta strandi106 – 1083Combined sources
Helixi112 – 1176Combined sources
Helixi130 – 1334Combined sources
Beta strandi134 – 1407Combined sources
Beta strandi146 – 1505Combined sources
Helixi156 – 1583Combined sources
Beta strandi160 – 1623Combined sources
Turni163 – 1664Combined sources
Beta strandi168 – 1758Combined sources
Beta strandi181 – 19010Combined sources
Helixi197 – 2048Combined sources
Beta strandi206 – 2149Combined sources
Beta strandi216 – 22914Combined sources
Beta strandi240 – 2423Combined sources
Helixi255 – 2573Combined sources
Helixi268 – 2703Combined sources
Beta strandi272 – 2754Combined sources
Beta strandi287 – 2948Combined sources
Helixi295 – 2973Combined sources
Helixi298 – 30710Combined sources
Helixi309 – 3124Combined sources
Helixi313 – 3153Combined sources
Beta strandi316 – 3249Combined sources
Beta strandi339 – 3468Combined sources
Helixi350 – 36415Combined sources
Helixi365 – 3673Combined sources
Helixi381 – 3855Combined sources
Helixi391 – 40111Combined sources
Helixi410 – 4167Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2VFRX-ray1.10A1-418[»]
2VFSX-ray1.60A1-418[»]
2VFTX-ray1.60A1-418[»]
2VFUX-ray1.90A1-418[»]
2VFVX-ray1.72A1-418[»]
ProteinModelPortaliQ9ZBU1.
SMRiQ9ZBU1. Positions 1-417.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9ZBU1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 179167FAD-binding PCMH-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 FAD-binding PCMH-type domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105QE3. Bacteria.
COG0277. LUCA.
HOGENOMiHOG000252847.
InParanoidiQ9ZBU1.
KOiK00594.
OMAiCEIRTVA.
OrthoDBiPOG091H08HK.
PhylomeDBiQ9ZBU1.

Family and domain databases

Gene3Di3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR007173. ALO.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view]
PfamiPF04030. ALO. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZBU1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDITVTNWA GNITYTAKEL LRPHSLDALR ALVADSARVR VLGSGHSFNE
60 70 80 90 100
IAEPGDGGVL LSLAGLPSVV DVDTAARTVR VGGGVRYAEL ARVVHARGLA
110 120 130 140 150
LPNMASLPHI SVAGSVATGT HGSGVGNGSL ASVVREVELV TADGSTVVIA
160 170 180 190 200
RGDERFGGAV TSLGALGVVT SLTLDLEPAY EMEQHVFTEL PLAGLDPATF
210 220 230 240 250
ETVMAAAYSV SLFTDWRAPG FRQVWLKRRT DRPLDGFPYA APAAEKMHPV
260 270 280 290 300
PGMPAVNCTE QFGVPGPWHE RLPHFRAEFT PSSGAELQSE YLMPREHALA
310 320 330 340 350
ALHAMDAIRE TLAPVLQTCE IRTVAADAQW LSPAYGRDTV AAHFTWVEDT
360 370 380 390 400
AAVLPVVRRL EEALVPFAAR PHWGKVFTVP AGELRALYPR LADFGALAGA
410
LDPAGKFTNA FVRGVLAG
Length:418
Mass (Da):44,347
Last modified:May 1, 1999 - v1
Checksum:i2A80DF7735A87DCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA22381.1.
PIRiT34660.
RefSeqiNP_630252.1. NC_003888.3.
WP_011030685.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA22381; CAA22381; CAA22381.
GeneIDi1101588.
KEGGisco:SCO6147.
PATRICi23742208. VBIStrCoe124346_6251.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA22381.1.
PIRiT34660.
RefSeqiNP_630252.1. NC_003888.3.
WP_011030685.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2VFRX-ray1.10A1-418[»]
2VFSX-ray1.60A1-418[»]
2VFTX-ray1.60A1-418[»]
2VFUX-ray1.90A1-418[»]
2VFVX-ray1.72A1-418[»]
ProteinModelPortaliQ9ZBU1.
SMRiQ9ZBU1. Positions 1-417.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6147.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA22381; CAA22381; CAA22381.
GeneIDi1101588.
KEGGisco:SCO6147.
PATRICi23742208. VBIStrCoe124346_6251.

Phylogenomic databases

eggNOGiENOG4105QE3. Bacteria.
COG0277. LUCA.
HOGENOMiHOG000252847.
InParanoidiQ9ZBU1.
KOiK00594.
OMAiCEIRTVA.
OrthoDBiPOG091H08HK.
PhylomeDBiQ9ZBU1.

Enzyme and pathway databases

BRENDAi1.1.3.41. 5998.

Miscellaneous databases

EvolutionaryTraceiQ9ZBU1.

Family and domain databases

Gene3Di3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR007173. ALO.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view]
PfamiPF04030. ALO. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiXYOA_STRCO
AccessioniPrimary (citable) accession number: Q9ZBU1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 12, 2003
Last sequence update: May 1, 1999
Last modified: September 7, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.