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Protein

Probable xylitol oxidase

Gene

xyoA

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol.By similarity

Catalytic activityi

An alditol + O2 = an aldose + H2O2.

Cofactori

FADBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein

Enzyme and pathway databases

BRENDAi1.1.3.41. 5998.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable xylitol oxidase (EC:1.1.3.41)
Alternative name(s):
Alditol oxidase
Gene namesi
Name:xyoA
Ordered Locus Names:SCO6147
ORF Names:SC1A9.11c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001281741 – 418Probable xylitol oxidaseAdd BLAST418

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei46Pros-8alpha-FAD histidine1

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6147.

Structurei

Secondary structure

1418
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi9 – 12Combined sources4
Helixi26 – 35Combined sources10
Beta strandi37 – 41Combined sources5
Helixi50 – 52Combined sources3
Beta strandi59 – 61Combined sources3
Beta strandi70 – 73Combined sources4
Turni74 – 77Combined sources4
Beta strandi78 – 82Combined sources5
Helixi87 – 96Combined sources10
Beta strandi106 – 108Combined sources3
Helixi112 – 117Combined sources6
Helixi130 – 133Combined sources4
Beta strandi134 – 140Combined sources7
Beta strandi146 – 150Combined sources5
Helixi156 – 158Combined sources3
Beta strandi160 – 162Combined sources3
Turni163 – 166Combined sources4
Beta strandi168 – 175Combined sources8
Beta strandi181 – 190Combined sources10
Helixi197 – 204Combined sources8
Beta strandi206 – 214Combined sources9
Beta strandi216 – 229Combined sources14
Beta strandi240 – 242Combined sources3
Helixi255 – 257Combined sources3
Helixi268 – 270Combined sources3
Beta strandi272 – 275Combined sources4
Beta strandi287 – 294Combined sources8
Helixi295 – 297Combined sources3
Helixi298 – 307Combined sources10
Helixi309 – 312Combined sources4
Helixi313 – 315Combined sources3
Beta strandi316 – 324Combined sources9
Beta strandi339 – 346Combined sources8
Helixi350 – 364Combined sources15
Helixi365 – 367Combined sources3
Helixi381 – 385Combined sources5
Helixi391 – 401Combined sources11
Helixi410 – 416Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2VFRX-ray1.10A1-418[»]
2VFSX-ray1.60A1-418[»]
2VFTX-ray1.60A1-418[»]
2VFUX-ray1.90A1-418[»]
2VFVX-ray1.72A1-418[»]
ProteinModelPortaliQ9ZBU1.
SMRiQ9ZBU1.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9ZBU1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 179FAD-binding PCMH-typePROSITE-ProRule annotationAdd BLAST167

Sequence similaritiesi

Contains 1 FAD-binding PCMH-type domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105QE3. Bacteria.
COG0277. LUCA.
HOGENOMiHOG000252847.
InParanoidiQ9ZBU1.
KOiK00594.
OMAiCEIRTVA.
OrthoDBiPOG091H08HK.
PhylomeDBiQ9ZBU1.

Family and domain databases

Gene3Di3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR007173. ALO.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view]
PfamiPF04030. ALO. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZBU1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDITVTNWA GNITYTAKEL LRPHSLDALR ALVADSARVR VLGSGHSFNE
60 70 80 90 100
IAEPGDGGVL LSLAGLPSVV DVDTAARTVR VGGGVRYAEL ARVVHARGLA
110 120 130 140 150
LPNMASLPHI SVAGSVATGT HGSGVGNGSL ASVVREVELV TADGSTVVIA
160 170 180 190 200
RGDERFGGAV TSLGALGVVT SLTLDLEPAY EMEQHVFTEL PLAGLDPATF
210 220 230 240 250
ETVMAAAYSV SLFTDWRAPG FRQVWLKRRT DRPLDGFPYA APAAEKMHPV
260 270 280 290 300
PGMPAVNCTE QFGVPGPWHE RLPHFRAEFT PSSGAELQSE YLMPREHALA
310 320 330 340 350
ALHAMDAIRE TLAPVLQTCE IRTVAADAQW LSPAYGRDTV AAHFTWVEDT
360 370 380 390 400
AAVLPVVRRL EEALVPFAAR PHWGKVFTVP AGELRALYPR LADFGALAGA
410
LDPAGKFTNA FVRGVLAG
Length:418
Mass (Da):44,347
Last modified:May 1, 1999 - v1
Checksum:i2A80DF7735A87DCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA22381.1.
PIRiT34660.
RefSeqiNP_630252.1. NC_003888.3.
WP_011030685.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA22381; CAA22381; CAA22381.
GeneIDi1101588.
KEGGisco:SCO6147.
PATRICi23742208. VBIStrCoe124346_6251.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA22381.1.
PIRiT34660.
RefSeqiNP_630252.1. NC_003888.3.
WP_011030685.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2VFRX-ray1.10A1-418[»]
2VFSX-ray1.60A1-418[»]
2VFTX-ray1.60A1-418[»]
2VFUX-ray1.90A1-418[»]
2VFVX-ray1.72A1-418[»]
ProteinModelPortaliQ9ZBU1.
SMRiQ9ZBU1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6147.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA22381; CAA22381; CAA22381.
GeneIDi1101588.
KEGGisco:SCO6147.
PATRICi23742208. VBIStrCoe124346_6251.

Phylogenomic databases

eggNOGiENOG4105QE3. Bacteria.
COG0277. LUCA.
HOGENOMiHOG000252847.
InParanoidiQ9ZBU1.
KOiK00594.
OMAiCEIRTVA.
OrthoDBiPOG091H08HK.
PhylomeDBiQ9ZBU1.

Enzyme and pathway databases

BRENDAi1.1.3.41. 5998.

Miscellaneous databases

EvolutionaryTraceiQ9ZBU1.

Family and domain databases

Gene3Di3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProiIPR007173. ALO.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR006094. Oxid_FAD_bind_N.
[Graphical view]
PfamiPF04030. ALO. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51387. FAD_PCMH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiXYOA_STRCO
AccessioniPrimary (citable) accession number: Q9ZBU1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 12, 2003
Last sequence update: May 1, 1999
Last modified: November 2, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.