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Protein
Submitted name:

Putative SecDF protein-export membrane protein

Gene

SCO6160

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, TranslocationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Putative SecDF protein-export membrane proteinImported
Gene namesi
Ordered Locus Names:SCO6160Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei296 – 31621HelicalSequence analysisAdd
BLAST
Transmembranei323 – 34321HelicalSequence analysisAdd
BLAST
Transmembranei349 – 36820HelicalSequence analysisAdd
BLAST
Transmembranei389 – 41527HelicalSequence analysisAdd
BLAST
Transmembranei427 – 45024HelicalSequence analysisAdd
BLAST
Transmembranei488 – 50821HelicalSequence analysisAdd
BLAST
Transmembranei601 – 61818HelicalSequence analysisAdd
BLAST
Transmembranei623 – 64624HelicalSequence analysisAdd
BLAST
Transmembranei652 – 67322HelicalSequence analysisAdd
BLAST
Transmembranei704 – 72219HelicalSequence analysisAdd
BLAST
Transmembranei728 – 75225HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1212Sequence analysisAdd
BLAST
Chaini13 – 795783Sequence analysisPRO_5004338844Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6160.

Structurei

3D structure databases

ProteinModelPortaliQ9ZBS8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG4107RSV. Bacteria.
COG0341. LUCA.
COG0342. LUCA.
HOGENOMiHOG000018636.
InParanoidiQ9ZBS8.
KOiK12257.
OMAiRTVNTGM.
OrthoDBiPOG091H02C5.
PhylomeDBiQ9ZBS8.

Family and domain databases

HAMAPiMF_01463_B. SecD_B. 1 hit.
MF_01464_B. SecF_B. 1 hit.
InterProiIPR005791. SecD.
IPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
IPR005665. SecF_bac.
[Graphical view]
PfamiPF07549. Sec_GG. 2 hits.
PF02355. SecD_SecF. 2 hits.
[Graphical view]
PRINTSiPR01755. SECFTRNLCASE.
TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
TIGR00966. 3a0501s07. 1 hit.
TIGR01129. secD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZBS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRSRPPSRS RSRTRSRSLN VRALVALAVM AGAVAIALTM PVRLGLDLRG
60 70 80 90 100
GTQIVLETKS TETTKADREA TDRTVEVLRG RIDALGVAEP TIVRSGENRV
110 120 130 140 150
VVELPGVQDP KKAADVLGRT AQLTVHSVLG AAEKPADATE GRTETAEDGE
160 170 180 190 200
RVLPDESGQS LRLKAATLTG QDVKGADARF DQQNGAGWTV TVDFKDSGSD
210 220 230 240 250
RWAQVTGEAA CNPAGDPTRR VAIVLDDKII SSPQVDPSVS CGAGITGGST
260 270 280 290 300
QITGSFDDAE ARELALLIKG GALPVPVETI EQRTIGATLG DEAIDAGAWA
310 320 330 340 350
AVIGTALTAL FIIVVYRLMG ALATVALLCY GLISYAALAA VGATLTLPGL
360 370 380 390 400
AGFVLAIGMA VDANVLVFER AREEQAARTR PSTRSALTAG FRSAFSAIAD
410 420 430 440 450
SNITTLIAAA LLFFLASGPV KGFGVTLGIG VLASMVSALV ITRVLAEFAA
460 470 480 490 500
SRPAVFRRPR ITGISSTGPV RDALLRRDPF LMRRPRRWLA ASLIVLVVAG
510 520 530 540 550
SGILVRGLNF GIEFTGGRLI EYSTATQVDP DRARDALADA GFPRAVVQSS
560 570 580 590 600
GDGDLTVRTE ELTDTEAATV TKAVAELGGE TEKVRDELIG PSLGEELRRD
610 620 630 640 650
ALIALGLALA AQLAYLAVRF RLLFGTAAVG ALAHDVVILV GVFAWLGKPI
660 670 680 690 700
DGVFLAALLT VIGYSVNDSV VLFDRIRELL GKERKAPFDR LTNDAILQTL
710 720 730 740 750
PRTVNTGMGA VLILASLAIL ADDSLTDFAL ALLIGVGVGT YSSVFTASPL
760 770 780 790
AIELHNRDTG SRPGRRRGGR TRATGKSEKP GKQVPTSRTE RQEVR
Length:795
Mass (Da):83,542
Last modified:May 1, 1999 - v1
Checksum:i38403390078C5BF5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA22394.1.
PIRiT34673.
RefSeqiNP_630265.1. NC_003888.3.
WP_011030698.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA22394; CAA22394; CAA22394.
GeneIDi1101601.
KEGGisco:SCO6160.
PATRICi23742242. VBIStrCoe124346_6268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA22394.1.
PIRiT34673.
RefSeqiNP_630265.1. NC_003888.3.
WP_011030698.1. NC_003888.3.

3D structure databases

ProteinModelPortaliQ9ZBS8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6160.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA22394; CAA22394; CAA22394.
GeneIDi1101601.
KEGGisco:SCO6160.
PATRICi23742242. VBIStrCoe124346_6268.

Phylogenomic databases

eggNOGiENOG4107RSV. Bacteria.
COG0341. LUCA.
COG0342. LUCA.
HOGENOMiHOG000018636.
InParanoidiQ9ZBS8.
KOiK12257.
OMAiRTVNTGM.
OrthoDBiPOG091H02C5.
PhylomeDBiQ9ZBS8.

Family and domain databases

HAMAPiMF_01463_B. SecD_B. 1 hit.
MF_01464_B. SecF_B. 1 hit.
InterProiIPR005791. SecD.
IPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
IPR005665. SecF_bac.
[Graphical view]
PfamiPF07549. Sec_GG. 2 hits.
PF02355. SecD_SecF. 2 hits.
[Graphical view]
PRINTSiPR01755. SECFTRNLCASE.
TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
TIGR00966. 3a0501s07. 1 hit.
TIGR01129. secD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9ZBS8_STRCO
AccessioniPrimary (citable) accession number: Q9ZBS8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: September 7, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.