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Protein

50S ribosomal protein L17

Gene

rplQ

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L17UniRule annotation
Gene namesi
Name:rplQUniRule annotation
Synonyms:rpl17UniRule annotation
Ordered Locus Names:TTHA1663
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001755471 – 11850S ribosomal protein L17Add BLAST118

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L32.UniRule annotation

Protein-protein interaction databases

STRINGi300852.TTHA1663.

Structurei

Secondary structure

1118
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi15 – 31Combined sources17
Beta strandi32 – 37Combined sources6
Helixi38 – 57Combined sources20
Helixi60 – 69Combined sources10
Helixi73 – 81Combined sources9
Helixi83 – 86Combined sources4
Beta strandi95 – 103Combined sources9
Turni105 – 107Combined sources3
Beta strandi110 – 116Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GD8X-ray2.30A/B/C/D/E/F/G/H/I1-118[»]
1VVJX-ray3.44RR/YR1-118[»]
1VY4X-ray2.60BR/DR1-118[»]
1VY5X-ray2.55BR/DR1-118[»]
1VY6X-ray2.90BR/DR1-118[»]
1VY7X-ray2.80BR/DR1-118[»]
4L47X-ray3.22RR/YR1-118[»]
4L71X-ray3.90RR/YR1-118[»]
4LELX-ray3.90RR/YR1-118[»]
4LFZX-ray3.92RR/YR1-118[»]
4LNTX-ray2.94RR/YR1-118[»]
4LSKX-ray3.48RR/YR1-118[»]
4LT8X-ray3.14RR/YR1-118[»]
4P6FX-ray3.60RR/YR1-118[»]
4P70X-ray3.68RR/YR1-118[»]
4TUAX-ray3.60RR/YR1-118[»]
4TUBX-ray3.60RR/YR1-118[»]
4TUCX-ray3.60RR/YR1-118[»]
4TUDX-ray3.60RR/YR1-118[»]
4TUEX-ray3.50RR/YR1-118[»]
4V4PX-ray5.50A01-118[»]
4V4RX-ray5.90BR1-118[»]
4V4SX-ray6.76BR1-118[»]
4V4TX-ray6.46BR1-118[»]
4V4XX-ray5.00BQ1-118[»]
4V4YX-ray5.50BQ1-118[»]
4V4ZX-ray4.51BQ1-118[»]
4V51X-ray2.80BR/DR1-118[»]
4V5AX-ray3.50BR/DR1-118[»]
4V5CX-ray3.30BR/DR1-118[»]
4V5DX-ray3.50BR/DR1-118[»]
4V5EX-ray3.45BR/DR1-118[»]
4V5FX-ray3.60BR/DR1-118[»]
4V5GX-ray3.60BR/DR1-118[»]
4V5JX-ray3.10BR/DR1-118[»]
4V5KX-ray3.20BR/DR1-118[»]
4V5LX-ray3.10BR1-118[»]
4V5Melectron microscopy7.80BR1-118[»]
4V5Nelectron microscopy7.60BR1-118[»]
4V5PX-ray3.10BR/DR1-118[»]
4V5QX-ray3.10BR/DR1-118[»]
4V5RX-ray3.10BR/DR1-118[»]
4V5SX-ray3.10BR/DR1-118[»]
4V68electron microscopy6.40BR2-118[»]
4V6AX-ray3.10BR/DR1-118[»]
4V6FX-ray3.10A0/D01-118[»]
4V6GX-ray3.50B0/D01-118[»]
4V7JX-ray3.30AR/BR1-118[»]
4V7KX-ray3.60AR/BR1-118[»]
4V7LX-ray3.00BR/DR1-118[»]
4V7MX-ray3.45BR/DR1-118[»]
4V7WX-ray3.00BR/DR1-118[»]
4V7XX-ray3.00BR/DR1-118[»]
4V7YX-ray3.00BR/DR1-118[»]
4V7ZX-ray3.10BR/DR1-118[»]
4V87X-ray3.10A0/D01-118[»]
4V8AX-ray3.20AR/BR1-118[»]
4V8BX-ray3.00B0/D01-118[»]
4V8CX-ray3.30A0/B01-118[»]
4V8DX-ray3.00B0/D01-118[»]
4V8EX-ray3.30A0/C01-118[»]
4V8FX-ray3.30A0/D01-118[»]
4V8GX-ray3.00BR/DR1-118[»]
4V8HX-ray3.10BR/DR1-118[»]
4V8IX-ray2.70BR/DR1-118[»]
4V8JX-ray3.90BR/DR1-118[»]
4V8NX-ray3.10BR/DR1-118[»]
4V8OX-ray3.80BR1-118[»]
4V8QX-ray3.10AR1-118[»]
4V8UX-ray3.70BR/DR1-118[»]
4V8XX-ray3.35BR/DR1-118[»]
4V90X-ray2.95BR2-118[»]
4V95X-ray3.20BR/DR1-118[»]
4V97X-ray3.52BR/DR1-118[»]
4V9AX-ray3.30B0/D01-118[»]
4V9BX-ray3.10B0/D01-118[»]
4V9HX-ray2.86BR1-118[»]
4V9IX-ray3.30BR/DR2-118[»]
4V9RX-ray3.00BR/DR1-118[»]
4V9SX-ray3.10BR/DR1-118[»]
4W2EX-ray2.90R1-118[»]
4W2FX-ray2.40BR/DR1-118[»]
4W2GX-ray2.55BR/DR1-118[»]
4W2HX-ray2.70BR/DR1-118[»]
4W2IX-ray2.70BR/DR1-118[»]
4W4GX-ray3.30RR/YR1-118[»]
4WPOX-ray2.80AR/CR1-118[»]
4WQ1X-ray3.1055/981-118[»]
4WQFX-ray2.80AR/CR1-118[»]
4WQRX-ray3.1555/981-118[»]
4WQUX-ray2.80AR/CR1-118[»]
4WQYX-ray2.80AR/CR1-118[»]
4WR6X-ray3.0555/981-118[»]
4WRAX-ray3.0555/981-118[»]
4WROX-ray3.05981-118[»]
4WSDX-ray2.9555/981-118[»]
4WSMX-ray3.3055/981-118[»]
4WT1X-ray3.0555/981-118[»]
4WT8X-ray3.40CQ/DQ2-118[»]
4WU1X-ray3.2055/981-118[»]
4WZDX-ray3.1055/981-118[»]
4WZOX-ray3.3055/981-118[»]
4Y4OX-ray2.301R/2R1-118[»]
4Y4PX-ray2.501R/2R1-118[»]
4YPBX-ray3.40RR/YR1-118[»]
4YZVX-ray3.10RR/YR1-118[»]
4Z3SX-ray2.651R/2R1-118[»]
4Z8CX-ray2.901R/2R1-118[»]
4ZERX-ray3.101R/2R1-118[»]
4ZSNX-ray3.60RR/YR1-118[»]
5A9Zelectron microscopy4.70AO2-118[»]
5AA0electron microscopy5.00AO2-118[»]
5CZPX-ray3.30RR/YR1-118[»]
5D8BX-ray3.63HB/L1-118[»]
5DFEX-ray3.10RR/YR1-118[»]
5DOXX-ray3.101R/2R1-118[»]
5DOYX-ray2.601R/2R1-118[»]
5E7KX-ray3.2055/981-118[»]
5E81X-ray2.9555/981-118[»]
5EL4X-ray3.1555/981-118[»]
5EL5X-ray3.1555/981-118[»]
5EL6X-ray3.1055/981-118[»]
5EL7X-ray3.1555/981-118[»]
5F8KX-ray2.801R/2R1-118[»]
5FDUX-ray2.901R/2R1-118[»]
5FDVX-ray2.801R/2R1-118[»]
5HAUX-ray3.001P/2P1-118[»]
5HCPX-ray2.891R/2R1-118[»]
5HCQX-ray2.801R/2R1-118[»]
5HCRX-ray2.801R/2R1-118[»]
5HD1X-ray2.701R/2R1-118[»]
5IB7X-ray2.9955/981-118[»]
5IB8X-ray3.1355/981-118[»]
5IBBX-ray2.9655/981-118[»]
5IMQelectron microscopy3.80j1-118[»]
5IMRelectron microscopy-j1-118[»]
5J30X-ray3.20RR/YR1-118[»]
5J3CX-ray3.04RR/YR1-118[»]
5J4BX-ray2.601R/2R1-118[»]
5J4CX-ray2.801R/2R1-118[»]
5J8BX-ray2.60R1-118[»]
ProteinModelPortaliQ9Z9H5.
SMRiQ9Z9H5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9Z9H5.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L17P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108ZT0. Bacteria.
COG0203. LUCA.
HOGENOMiHOG000019780.
KOiK02879.
OMAiKTVQRRG.
PhylomeDBiQ9Z9H5.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
HAMAPiMF_01368. Ribosomal_L17. 1 hit.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9Z9H5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRHLKSGRKL NRHSSHRLAL YRNQAKSLLT HGRITTTVPK AKELRGFVDH
60 70 80 90 100
LIHLAKRGDL HARRLVLRDL QDVKLVRKLF DEIAPRYRDR QGGYTRVLKL
110
AERRRGDGAP LALVELVE
Length:118
Mass (Da):13,715
Last modified:May 1, 1999 - v1
Checksum:iC9B8DD552F6C42AF
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti3H → A AA sequence (PubMed:11154066).Curated1
Sequence conflicti13H → A AA sequence (PubMed:11154066).Curated1

Mass spectrometryi

Molecular mass is 13717 Da from positions 1 - 118. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB024328 Genomic DNA. Translation: BAA75550.1.
AP008226 Genomic DNA. Translation: BAD71486.1.
RefSeqiWP_008633358.1. NC_006461.1.
YP_144929.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71486; BAD71486; BAD71486.
GeneIDi3168022.
KEGGittj:TTHA1663.
PATRICi23958281. VBITheThe93045_1633.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB024328 Genomic DNA. Translation: BAA75550.1.
AP008226 Genomic DNA. Translation: BAD71486.1.
RefSeqiWP_008633358.1. NC_006461.1.
YP_144929.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GD8X-ray2.30A/B/C/D/E/F/G/H/I1-118[»]
1VVJX-ray3.44RR/YR1-118[»]
1VY4X-ray2.60BR/DR1-118[»]
1VY5X-ray2.55BR/DR1-118[»]
1VY6X-ray2.90BR/DR1-118[»]
1VY7X-ray2.80BR/DR1-118[»]
4L47X-ray3.22RR/YR1-118[»]
4L71X-ray3.90RR/YR1-118[»]
4LELX-ray3.90RR/YR1-118[»]
4LFZX-ray3.92RR/YR1-118[»]
4LNTX-ray2.94RR/YR1-118[»]
4LSKX-ray3.48RR/YR1-118[»]
4LT8X-ray3.14RR/YR1-118[»]
4P6FX-ray3.60RR/YR1-118[»]
4P70X-ray3.68RR/YR1-118[»]
4TUAX-ray3.60RR/YR1-118[»]
4TUBX-ray3.60RR/YR1-118[»]
4TUCX-ray3.60RR/YR1-118[»]
4TUDX-ray3.60RR/YR1-118[»]
4TUEX-ray3.50RR/YR1-118[»]
4V4PX-ray5.50A01-118[»]
4V4RX-ray5.90BR1-118[»]
4V4SX-ray6.76BR1-118[»]
4V4TX-ray6.46BR1-118[»]
4V4XX-ray5.00BQ1-118[»]
4V4YX-ray5.50BQ1-118[»]
4V4ZX-ray4.51BQ1-118[»]
4V51X-ray2.80BR/DR1-118[»]
4V5AX-ray3.50BR/DR1-118[»]
4V5CX-ray3.30BR/DR1-118[»]
4V5DX-ray3.50BR/DR1-118[»]
4V5EX-ray3.45BR/DR1-118[»]
4V5FX-ray3.60BR/DR1-118[»]
4V5GX-ray3.60BR/DR1-118[»]
4V5JX-ray3.10BR/DR1-118[»]
4V5KX-ray3.20BR/DR1-118[»]
4V5LX-ray3.10BR1-118[»]
4V5Melectron microscopy7.80BR1-118[»]
4V5Nelectron microscopy7.60BR1-118[»]
4V5PX-ray3.10BR/DR1-118[»]
4V5QX-ray3.10BR/DR1-118[»]
4V5RX-ray3.10BR/DR1-118[»]
4V5SX-ray3.10BR/DR1-118[»]
4V68electron microscopy6.40BR2-118[»]
4V6AX-ray3.10BR/DR1-118[»]
4V6FX-ray3.10A0/D01-118[»]
4V6GX-ray3.50B0/D01-118[»]
4V7JX-ray3.30AR/BR1-118[»]
4V7KX-ray3.60AR/BR1-118[»]
4V7LX-ray3.00BR/DR1-118[»]
4V7MX-ray3.45BR/DR1-118[»]
4V7WX-ray3.00BR/DR1-118[»]
4V7XX-ray3.00BR/DR1-118[»]
4V7YX-ray3.00BR/DR1-118[»]
4V7ZX-ray3.10BR/DR1-118[»]
4V87X-ray3.10A0/D01-118[»]
4V8AX-ray3.20AR/BR1-118[»]
4V8BX-ray3.00B0/D01-118[»]
4V8CX-ray3.30A0/B01-118[»]
4V8DX-ray3.00B0/D01-118[»]
4V8EX-ray3.30A0/C01-118[»]
4V8FX-ray3.30A0/D01-118[»]
4V8GX-ray3.00BR/DR1-118[»]
4V8HX-ray3.10BR/DR1-118[»]
4V8IX-ray2.70BR/DR1-118[»]
4V8JX-ray3.90BR/DR1-118[»]
4V8NX-ray3.10BR/DR1-118[»]
4V8OX-ray3.80BR1-118[»]
4V8QX-ray3.10AR1-118[»]
4V8UX-ray3.70BR/DR1-118[»]
4V8XX-ray3.35BR/DR1-118[»]
4V90X-ray2.95BR2-118[»]
4V95X-ray3.20BR/DR1-118[»]
4V97X-ray3.52BR/DR1-118[»]
4V9AX-ray3.30B0/D01-118[»]
4V9BX-ray3.10B0/D01-118[»]
4V9HX-ray2.86BR1-118[»]
4V9IX-ray3.30BR/DR2-118[»]
4V9RX-ray3.00BR/DR1-118[»]
4V9SX-ray3.10BR/DR1-118[»]
4W2EX-ray2.90R1-118[»]
4W2FX-ray2.40BR/DR1-118[»]
4W2GX-ray2.55BR/DR1-118[»]
4W2HX-ray2.70BR/DR1-118[»]
4W2IX-ray2.70BR/DR1-118[»]
4W4GX-ray3.30RR/YR1-118[»]
4WPOX-ray2.80AR/CR1-118[»]
4WQ1X-ray3.1055/981-118[»]
4WQFX-ray2.80AR/CR1-118[»]
4WQRX-ray3.1555/981-118[»]
4WQUX-ray2.80AR/CR1-118[»]
4WQYX-ray2.80AR/CR1-118[»]
4WR6X-ray3.0555/981-118[»]
4WRAX-ray3.0555/981-118[»]
4WROX-ray3.05981-118[»]
4WSDX-ray2.9555/981-118[»]
4WSMX-ray3.3055/981-118[»]
4WT1X-ray3.0555/981-118[»]
4WT8X-ray3.40CQ/DQ2-118[»]
4WU1X-ray3.2055/981-118[»]
4WZDX-ray3.1055/981-118[»]
4WZOX-ray3.3055/981-118[»]
4Y4OX-ray2.301R/2R1-118[»]
4Y4PX-ray2.501R/2R1-118[»]
4YPBX-ray3.40RR/YR1-118[»]
4YZVX-ray3.10RR/YR1-118[»]
4Z3SX-ray2.651R/2R1-118[»]
4Z8CX-ray2.901R/2R1-118[»]
4ZERX-ray3.101R/2R1-118[»]
4ZSNX-ray3.60RR/YR1-118[»]
5A9Zelectron microscopy4.70AO2-118[»]
5AA0electron microscopy5.00AO2-118[»]
5CZPX-ray3.30RR/YR1-118[»]
5D8BX-ray3.63HB/L1-118[»]
5DFEX-ray3.10RR/YR1-118[»]
5DOXX-ray3.101R/2R1-118[»]
5DOYX-ray2.601R/2R1-118[»]
5E7KX-ray3.2055/981-118[»]
5E81X-ray2.9555/981-118[»]
5EL4X-ray3.1555/981-118[»]
5EL5X-ray3.1555/981-118[»]
5EL6X-ray3.1055/981-118[»]
5EL7X-ray3.1555/981-118[»]
5F8KX-ray2.801R/2R1-118[»]
5FDUX-ray2.901R/2R1-118[»]
5FDVX-ray2.801R/2R1-118[»]
5HAUX-ray3.001P/2P1-118[»]
5HCPX-ray2.891R/2R1-118[»]
5HCQX-ray2.801R/2R1-118[»]
5HCRX-ray2.801R/2R1-118[»]
5HD1X-ray2.701R/2R1-118[»]
5IB7X-ray2.9955/981-118[»]
5IB8X-ray3.1355/981-118[»]
5IBBX-ray2.9655/981-118[»]
5IMQelectron microscopy3.80j1-118[»]
5IMRelectron microscopy-j1-118[»]
5J30X-ray3.20RR/YR1-118[»]
5J3CX-ray3.04RR/YR1-118[»]
5J4BX-ray2.601R/2R1-118[»]
5J4CX-ray2.801R/2R1-118[»]
5J8BX-ray2.60R1-118[»]
ProteinModelPortaliQ9Z9H5.
SMRiQ9Z9H5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA1663.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD71486; BAD71486; BAD71486.
GeneIDi3168022.
KEGGittj:TTHA1663.
PATRICi23958281. VBITheThe93045_1633.

Phylogenomic databases

eggNOGiENOG4108ZT0. Bacteria.
COG0203. LUCA.
HOGENOMiHOG000019780.
KOiK02879.
OMAiKTVQRRG.
PhylomeDBiQ9Z9H5.

Miscellaneous databases

EvolutionaryTraceiQ9Z9H5.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
HAMAPiMF_01368. Ribosomal_L17. 1 hit.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRL17_THET8
AccessioniPrimary (citable) accession number: Q9Z9H5
Secondary accession number(s): Q5SHR7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: November 30, 2016
This is version 125 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.