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Protein

Superoxide dismutase [Mn]

Gene

sodA

Organism
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

Cofactori

Mn2+By similarityNote: Binds 1 Mn2+ ion per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi30 – 301ManganeseBy similarity
Metal bindingi78 – 781ManganeseBy similarity
Metal bindingi166 – 1661ManganeseBy similarity
Metal bindingi170 – 1701ManganeseBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Manganese, Metal-binding

Enzyme and pathway databases

BioCyciCPNE115711:GI7B-743-MONOMER.
CPNE115713:GHEY-57-MONOMER.
CPNE138677:GH8N-58-MONOMER.
CPNE182082:GH4N-58-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Mn] (EC:1.15.1.1)
Gene namesi
Name:sodA
Synonyms:sodM
Ordered Locus Names:CPn_0057, CP_0718, CpB0058
OrganismiChlamydia pneumoniae (Chlamydophila pneumoniae)
Taxonomic identifieri83558 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
ProteomesiUP000000583 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 207207Superoxide dismutase [Mn]PRO_0000160026Add
BLAST

Interactioni

Subunit structurei

Homodimer.By similarity

Protein-protein interaction databases

STRINGi115713.CPn0057.

Structurei

3D structure databases

ProteinModelPortaliQ9Z9C4.
SMRiQ9Z9C4. Positions 6-202.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiEQVYDHQ.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9Z9C4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFVPYSLPE LPYDYDALEP VISSEIMILH HQKHHQIYIN NLNAALKRLD
60 70 80 90 100
AAETQQNLNE LIALEPALRF NGGGHINHSL FWETLAPIDQ GGGQPPKHEL
110 120 130 140 150
LSLIERFWGT MDNFLKKLIE VAAGVQGSGW AWLGFCPAKQ ELVLQATANQ
160 170 180 190 200
DPLEPLTGKL PLLGVDVWEH AYYLQYKNVR MDYLKAFPQI INWGHIENRF

SEIISSK
Length:207
Mass (Da):23,541
Last modified:May 1, 1999 - v1
Checksum:i45A4A6FF096F8934
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001363 Genomic DNA. Translation: AAD18210.1.
AE002161 Genomic DNA. Translation: AAF38524.1.
BA000008 Genomic DNA. Translation: BAA98268.1.
AE009440 Genomic DNA. Translation: AAP97991.1.
PIRiB72124.
B86498.
RefSeqiNP_224265.1. NC_000922.1.

Genome annotation databases

EnsemblBacteriaiAAD18210; AAD18210; CPn_0057.
AAF38524; AAF38524; CP_0718.
AAP97991; AAP97991; CpB0058.
BAA98268; BAA98268; BAA98268.
GeneIDi894772.
KEGGicpa:CP0718.
cpj:CPj0057.
cpn:CPn0057.
cpt:CpB0058.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001363 Genomic DNA. Translation: AAD18210.1.
AE002161 Genomic DNA. Translation: AAF38524.1.
BA000008 Genomic DNA. Translation: BAA98268.1.
AE009440 Genomic DNA. Translation: AAP97991.1.
PIRiB72124.
B86498.
RefSeqiNP_224265.1. NC_000922.1.

3D structure databases

ProteinModelPortaliQ9Z9C4.
SMRiQ9Z9C4. Positions 6-202.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi115713.CPn0057.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD18210; AAD18210; CPn_0057.
AAF38524; AAF38524; CP_0718.
AAP97991; AAP97991; CpB0058.
BAA98268; BAA98268; BAA98268.
GeneIDi894772.
KEGGicpa:CP0718.
cpj:CPj0057.
cpn:CPn0057.
cpt:CpB0058.

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiEQVYDHQ.
OrthoDBiEOG63NMNT.

Enzyme and pathway databases

BioCyciCPNE115711:GI7B-743-MONOMER.
CPNE115713:GHEY-57-MONOMER.
CPNE138677:GH8N-58-MONOMER.
CPNE182082:GH4N-58-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CWL029.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AR39.
  3. "Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA."
    Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T.
    Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: J138.
  4. "The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis."
    Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K.
    Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TW-183.

Entry informationi

Entry nameiSODM_CHLPN
AccessioniPrimary (citable) accession number: Q9Z9C4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: May 1, 1999
Last modified: July 22, 2015
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.