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Q9Z9C4 (SODM_CHLPN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 97. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Mn]

EC=1.15.1.1
Gene names
Name:sodA
Synonyms:sodM
Ordered Locus Names:CPn_0057, CP_0718, CpB0058
OrganismChlamydia pneumoniae (Chlamydophila pneumoniae) [Complete proteome] [HAMAP]
Taxonomic identifier83558 [NCBI]
Taxonomic lineageBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Cofactor

Binds 1 manganese ion per subunit By similarity.

Subunit structure

Homodimer By similarity.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
   LigandManganese
Metal-binding
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 207207Superoxide dismutase [Mn]
PRO_0000160026

Sites

Metal binding301Manganese By similarity
Metal binding781Manganese By similarity
Metal binding1661Manganese By similarity
Metal binding1701Manganese By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9Z9C4 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 45A4A6FF096F8934

FASTA20723,541
        10         20         30         40         50         60 
MSFVPYSLPE LPYDYDALEP VISSEIMILH HQKHHQIYIN NLNAALKRLD AAETQQNLNE 

        70         80         90        100        110        120 
LIALEPALRF NGGGHINHSL FWETLAPIDQ GGGQPPKHEL LSLIERFWGT MDNFLKKLIE 

       130        140        150        160        170        180 
VAAGVQGSGW AWLGFCPAKQ ELVLQATANQ DPLEPLTGKL PLLGVDVWEH AYYLQYKNVR 

       190        200 
MDYLKAFPQI INWGHIENRF SEIISSK 

« Hide

References

[1]"Comparative genomes of Chlamydia pneumoniae and C. trachomatis."
Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W., Olinger L., Grimwood J., Davis R.W., Stephens R.S.
Nat. Genet. 21:385-389(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CWL029.
[2]"Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39."
Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L. expand/collapse author list , Nelson W.C., DeBoy R.T., Kolonay J.F., McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M.
Nucleic Acids Res. 28:1397-1406(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AR39.
[3]"Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA."
Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T.
Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: J138.
[4]"The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis."
Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TW-183.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE001363 Genomic DNA. Translation: AAD18210.1.
AE002161 Genomic DNA. Translation: AAF38524.1.
BA000008 Genomic DNA. Translation: BAA98268.1.
AE009440 Genomic DNA. Translation: AAP97991.1.
PIRB72124.
B86498.
RefSeqNP_224265.1. NC_000922.1.
NP_300117.1. NC_002491.1.
NP_445260.1. NC_002179.2.
NP_876334.1. NC_005043.1.

3D structure databases

ProteinModelPortalQ9Z9C4.
SMRQ9Z9C4. Positions 6-202.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING115713.CPn0057.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAD18210; AAD18210; CPn_0057.
AAF38524; AAF38524; CP_0718.
AAP97991; AAP97991; CpB0058.
BAA98268; BAA98268; BAA98268.
GeneID1466741.
894772.
918846.
963182.
KEGGcpa:CP0718.
cpj:CPj0057.
cpn:CPn0057.
cpt:CpB0058.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013583.
KOK04564.
OMATERYTAC.
OrthoDBEOG63NMNT.

Enzyme and pathway databases

BioCycCPNE115711:GI7B-743-MONOMER.
CPNE115713:GHEY-57-MONOMER.
CPNE138677:GH8N-58-MONOMER.
CPNE182082:GH4N-58-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSODM_CHLPN
AccessionPrimary (citable) accession number: Q9Z9C4
Entry history
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: May 1, 1999
Last modified: July 9, 2014
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families