Q9Z9C4 (SODM_CHLPN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Mn]
EC=1.15.1.1

Gene names

Name:	sodA
Synonyms:	sodM
Ordered Locus Names:	CPn_0057, CP_0718, CpB0058

Organism

Chlamydia pneumoniae (Chlamydophila pneumoniae) [Complete proteome] [HAMAP]

Taxonomic identifier

83558 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chlamydiae/Verrucomicrobia group › Chlamydiae › Chlamydiia › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydia

Protein attributes

Sequence length	207 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2.
Cofactor	Binds 1 manganese ion per subunit By similarity.
Subunit structure	Homodimer By similarity.
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
Ligand	Manganese Metal-binding
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 207	207	Superoxide dismutase [Mn]		PRO_0000160026
Sites
	Metal binding	30	1	Manganese By similarity
	Metal binding	78	1	Manganese By similarity
	Metal binding	166	1	Manganese By similarity
	Metal binding	170	1	Manganese By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q9Z9C4 [UniParc]. Last modified May 1, 1999. Version 1. Checksum: 45A4A6FF096F8934	FASTA	207	23,541
	10 20 30 40 50 60 MSFVPYSLPE LPYDYDALEP VISSEIMILH HQKHHQIYIN NLNAALKRLD AAETQQNLNE 70 80 90 100 110 120 LIALEPALRF NGGGHINHSL FWETLAPIDQ GGGQPPKHEL LSLIERFWGT MDNFLKKLIE 130 140 150 160 170 180 VAAGVQGSGW AWLGFCPAKQ ELVLQATANQ DPLEPLTGKL PLLGVDVWEH AYYLQYKNVR 190 200 MDYLKAFPQI INWGHIENRF SEIISSK

References

[1]	"Comparative genomes of Chlamydia pneumoniae and C. trachomatis." Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W., Olinger L., Grimwood J., Davis R.W., Stephens R.S. Nat. Genet. 21:385-389(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CWL029.
[2]	"Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39." Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L. , Nelson W.C., DeBoy R.T., Kolonay J.F., McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M. Nucleic Acids Res. 28:1397-1406(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AR39.
[3]	"Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA." Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T. Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: J138.
[4]	"The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis." Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K. Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TW-183.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE001363 Genomic DNA. Translation: AAD18210.1. AE002161 Genomic DNA. Translation: AAF38524.1. BA000008 Genomic DNA. Translation: BAA98268.1. AE009440 Genomic DNA. Translation: AAP97991.1.
PIR	B72124. B86498.
RefSeq	NP_224265.1. NC_000922.1. NP_300117.1. NC_002491.1. NP_445260.1. NC_002179.2. NP_876334.1. NC_005043.1.
3D structure databases
ProteinModelPortal	Q9Z9C4.
SMR	Q9Z9C4. Positions 6-202.
ModBase	Search...
Protein-protein interaction databases
STRING	115713.CPn0057.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAD18210; AAD18210; CPn_0057. AAF38524; AAF38524; CP_0718. AAP97991; AAP97991; CpB0058. BAA98268; BAA98268; BAA98268.
GeneID	1466741. 894772. 918846. 963182.
KEGG	cpa:CP0718. cpj:CPj0057. cpn:CPn0057. cpt:CpB0058.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013583.
KO	K04564.
OMA	PPKHELL.
ProtClustDB	CLSK871309.
Enzyme and pathway databases
BioCyc	CPNE115711:GI7B-716-MONOMER. CPNE115713:GHEY-60-MONOMER. CPNE138677:GH8N-55-MONOMER. CPNE182082:GH4N-59-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SODM_CHLPN

Accession

Primary (citable) accession number: Q9Z9C4

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 26, 2001
Last sequence update:	May 1, 1999
Last modified:	May 1, 2013
This is version 92 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program