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Q9Z876 (GLGB_CHLPN) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 101. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
1,4-alpha-glucan branching enzyme GlgB

EC=2.4.1.18
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name=BE
Gene names
Name:glgB
Ordered Locus Names:CPn_0475, CP_0279, CpB0494
OrganismChlamydia pneumoniae (Chlamydophila pneumoniae) [Complete proteome] [HAMAP]
Taxonomic identifier83558 [NCBI]
Taxonomic lineageBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia

Protein attributes

Sequence length720 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity. HAMAP-Rule MF_00685

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. HAMAP-Rule MF_00685

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00685

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00685

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7207201,4-alpha-glucan branching enzyme GlgB HAMAP-Rule MF_00685
PRO_0000188693

Sites

Active site4001Nucleophile By similarity
Active site4531Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9Z876 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: CCF5FD309971C87B

FASTA72082,839
        10         20         30         40         50         60 
MVDKLIHPWD LDLLVSGRQK DPHKLLGILA SEDSSDHIVI FRPGAHTVAI ELLGELHHAV 

        70         80         90        100        110        120 
AYRSGLFFLS VPKGIGHGDY RVYHQNGLLA HDPYAFPPLW GEIDSFLFHR GTHYRIYERM 

       130        140        150        160        170        180 
GAIPMEVQGI SGVLFVLWAP HAQRVSVVGD FNFWHGLVNP LRKISDQGIW ELFVPGLGEG 

       190        200        210        220        230        240 
IRYKWEIVTQ SGNVIVKTDP YGKSFDPPPQ GTARVADSES YSWSDHRWME RRSKQSEGPV 

       250        260        270        280        290        300 
TIYEVHLGSW QWQEGRPLSY SEMAHRLASY CKEMHYTHVE LLPITEHPLN ESWGYQVTGY 

       310        320        330        340        350        360 
YAPTSRYGTL QEFQYFVDYL HKENIGIILD WVPGHFPVDA FALASFDGEP LYEYTGHSQA 

       370        380        390        400        410        420 
LHPHWNTFTF DYSRHEVTNF LLGSALFWLD KMHIDGLRVD AVASMLYRDY GREDGEWTPN 

       430        440        450        460        470        480 
IYGGKENLES IEFLKHLNSV IHKEFSGVLT FAEESTAFPG VTKDVDQGGL GFDYKWNLGW 

       490        500        510        520        530        540 
MHDTFHYFMK DPMYRKYHQK DLTFSLWYAF QESFILPLSH DEVVHGKGSL VNKLPGDTWT 

       550        560        570        580        590        600 
RFAQMRVLLS YQICLPGKKL LFMGGEFGQY GEWSPDRPLD WELLNHHYHK TLRNCVSALN 

       610        620        630        640        650        660 
ALYIHQPYLW MQESSQECFH WVDFHDIENN VIAYYRFAGS NRSSALLCVH HFSASTFPSY 

       670        680        690        700        710        720 
VLRCEGVKHC ELLLNTDDES FGGSGKGNRA PVVCQDQGVA WGLDIELPPL ATVIYLVTFF 

« Hide

References

[1]"Comparative genomes of Chlamydia pneumoniae and C. trachomatis."
Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W., Olinger L., Grimwood J., Davis R.W., Stephens R.S.
Nat. Genet. 21:385-389(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CWL029.
[2]"Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39."
Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L. expand/collapse author list , Nelson W.C., DeBoy R.T., Kolonay J.F., McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M.
Nucleic Acids Res. 28:1397-1406(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AR39.
[3]"Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA."
Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T.
Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: J138.
[4]"The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis."
Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TW-183.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE001363 Genomic DNA. Translation: AAD18615.1.
AE002161 Genomic DNA. Translation: AAF38137.1.
BA000008 Genomic DNA. Translation: BAA98681.1.
AE009440 Genomic DNA. Translation: AAP98425.1.
PIRE72074.
G86549.
RefSeqNP_224671.1. NC_000922.1.
NP_300530.1. NC_002491.1.
NP_444829.1. NC_002179.2.
NP_876768.1. NC_005043.1.

3D structure databases

ProteinModelPortalQ9Z876.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING115713.CPn0475.

Protein family/group databases

CAZyCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAD18615; AAD18615; CPn_0475.
AAF38137; AAF38137; CP_0279.
AAP98425; AAP98425; CpB0494.
BAA98681; BAA98681; BAA98681.
GeneID1467175.
895645.
919217.
963361.
KEGGcpa:CP0279.
cpj:CPj0475.
cpn:CPn0475.
cpt:CpB0494.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0296.
HOGENOMHOG000283037.
KOK00700.
OMAAKLLFMG.
OrthoDBEOG6JX7GT.

Enzyme and pathway databases

BioCycCPNE115711:GI7B-292-MONOMER.
CPNE115713:GHEY-491-MONOMER.
CPNE138677:GH8N-484-MONOMER.
CPNE182082:GH4N-506-MONOMER.
UniPathwayUPA00164.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPMF_00685. GlgB.
InterProIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsTIGR01515. branching_enzym. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGB_CHLPN
AccessionPrimary (citable) accession number: Q9Z876
Entry history
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: May 1, 1999
Last modified: June 11, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries