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Q9Z876

- GLGB_CHLPN

UniProt

Q9Z876 - GLGB_CHLPN

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 102 (01 Oct 2014)
      Sequence version 1 (01 May 1999)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei400 – 4001NucleophileUniRule annotation
    Active sitei453 – 4531Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciCPNE115711:GI7B-292-MONOMER.
    CPNE115713:GHEY-491-MONOMER.
    CPNE138677:GH8N-484-MONOMER.
    CPNE182082:GH4N-506-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:CPn_0475, CP_0279, CpB0494
    OrganismiChlamydia pneumoniae (Chlamydophila pneumoniae)
    Taxonomic identifieri83558 [NCBI]
    Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
    ProteomesiUP000000424: Chromosome, UP000000583: Chromosome, UP000000801: Chromosome, UP000000802: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7207201,4-alpha-glucan branching enzyme GlgBPRO_0000188693Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi115713.CPn0475.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9Z876.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiAKLLFMG.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9Z876-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVDKLIHPWD LDLLVSGRQK DPHKLLGILA SEDSSDHIVI FRPGAHTVAI    50
    ELLGELHHAV AYRSGLFFLS VPKGIGHGDY RVYHQNGLLA HDPYAFPPLW 100
    GEIDSFLFHR GTHYRIYERM GAIPMEVQGI SGVLFVLWAP HAQRVSVVGD 150
    FNFWHGLVNP LRKISDQGIW ELFVPGLGEG IRYKWEIVTQ SGNVIVKTDP 200
    YGKSFDPPPQ GTARVADSES YSWSDHRWME RRSKQSEGPV TIYEVHLGSW 250
    QWQEGRPLSY SEMAHRLASY CKEMHYTHVE LLPITEHPLN ESWGYQVTGY 300
    YAPTSRYGTL QEFQYFVDYL HKENIGIILD WVPGHFPVDA FALASFDGEP 350
    LYEYTGHSQA LHPHWNTFTF DYSRHEVTNF LLGSALFWLD KMHIDGLRVD 400
    AVASMLYRDY GREDGEWTPN IYGGKENLES IEFLKHLNSV IHKEFSGVLT 450
    FAEESTAFPG VTKDVDQGGL GFDYKWNLGW MHDTFHYFMK DPMYRKYHQK 500
    DLTFSLWYAF QESFILPLSH DEVVHGKGSL VNKLPGDTWT RFAQMRVLLS 550
    YQICLPGKKL LFMGGEFGQY GEWSPDRPLD WELLNHHYHK TLRNCVSALN 600
    ALYIHQPYLW MQESSQECFH WVDFHDIENN VIAYYRFAGS NRSSALLCVH 650
    HFSASTFPSY VLRCEGVKHC ELLLNTDDES FGGSGKGNRA PVVCQDQGVA 700
    WGLDIELPPL ATVIYLVTFF 720
    Length:720
    Mass (Da):82,839
    Last modified:May 1, 1999 - v1
    Checksum:iCCF5FD309971C87B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE001363 Genomic DNA. Translation: AAD18615.1.
    AE002161 Genomic DNA. Translation: AAF38137.1.
    BA000008 Genomic DNA. Translation: BAA98681.1.
    AE009440 Genomic DNA. Translation: AAP98425.1.
    PIRiE72074.
    G86549.
    RefSeqiNP_224671.1. NC_000922.1.
    NP_300530.1. NC_002491.1.
    NP_444829.1. NC_002179.2.
    NP_876768.1. NC_005043.1.

    Genome annotation databases

    EnsemblBacteriaiAAD18615; AAD18615; CPn_0475.
    AAF38137; AAF38137; CP_0279.
    AAP98425; AAP98425; CpB0494.
    BAA98681; BAA98681; BAA98681.
    GeneIDi1467175.
    895645.
    919217.
    963361.
    KEGGicpa:CP0279.
    cpj:CPj0475.
    cpn:CPn0475.
    cpt:CpB0494.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE001363 Genomic DNA. Translation: AAD18615.1 .
    AE002161 Genomic DNA. Translation: AAF38137.1 .
    BA000008 Genomic DNA. Translation: BAA98681.1 .
    AE009440 Genomic DNA. Translation: AAP98425.1 .
    PIRi E72074.
    G86549.
    RefSeqi NP_224671.1. NC_000922.1.
    NP_300530.1. NC_002491.1.
    NP_444829.1. NC_002179.2.
    NP_876768.1. NC_005043.1.

    3D structure databases

    ProteinModelPortali Q9Z876.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 115713.CPn0475.

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAD18615 ; AAD18615 ; CPn_0475 .
    AAF38137 ; AAF38137 ; CP_0279 .
    AAP98425 ; AAP98425 ; CpB0494 .
    BAA98681 ; BAA98681 ; BAA98681 .
    GeneIDi 1467175.
    895645.
    919217.
    963361.
    KEGGi cpa:CP0279.
    cpj:CPj0475.
    cpn:CPn0475.
    cpt:CpB0494.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi AKLLFMG.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci CPNE115711:GI7B-292-MONOMER.
    CPNE115713:GHEY-491-MONOMER.
    CPNE138677:GH8N-484-MONOMER.
    CPNE182082:GH4N-506-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CWL029.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AR39.
    3. "Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA."
      Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T.
      Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: J138.
    4. "The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis."
      Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K.
      Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TW-183.

    Entry informationi

    Entry nameiGLGB_CHLPN
    AccessioniPrimary (citable) accession number: Q9Z876
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 15, 2003
    Last sequence update: May 1, 1999
    Last modified: October 1, 2014
    This is version 102 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3