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Q9Z7E4 (RECA_CHLPN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 105. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein RecA
Alternative name(s):
Recombinase A
Gene names
Name:recA
Ordered Locus Names:CPn_0762, CP_1110, CpB0790
OrganismChlamydia pneumoniae (Chlamydophila pneumoniae) [Complete proteome] [HAMAP]
Taxonomic identifier83558 [NCBI]
Taxonomic lineageBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage By similarity. HAMAP-Rule MF_00268

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00268.

Sequence similarities

Belongs to the RecA family.

Ontologies

Keywords
   Biological processDNA damage
DNA recombination
DNA repair
SOS response
   Cellular componentCytoplasm
   LigandATP-binding
DNA-binding
Nucleotide-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: UniProtKB-HAMAP

DNA repair

Inferred from electronic annotation. Source: UniProtKB-HAMAP

SOS response

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

DNA-dependent ATPase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

damaged DNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

single-stranded DNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 353353Protein RecA HAMAP-Rule MF_00268
PRO_0000122685

Regions

Nucleotide binding67 – 748ATP By similarity

Experimental info

Sequence conflict3191E → K in AAP98719. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Q9Z7E4 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 3D914C27E729A101

FASTA35338,228
        10         20         30         40         50         60 
MNLPDRKKAL EAAVAYIEKQ FGAGSIMSLG RHSATHEIST IKTGALSLDL ALGIHGVPKG 

        70         80         90        100        110        120 
RVIEIFGPES SGKTTLATHI VANAQKMGGV AAYIDAEHAL DPSYASLIGV NIDDLMISQP 

       130        140        150        160        170        180 
DCGEDALSIA ELLARSGAVD VIVIDSVAAL VPKSELEGDI GDVHVGLQAR MMSQALRKLT 

       190        200        210        220        230        240 
ATLSRSQTCA VFINQIREKI GVSFGNPETT TGGRALKFYS SIRLDIRRIG SIKGSDNSDI 

       250        260        270        280        290        300 
GNRIKVKVAK NKLAPPFRIA EFDILFNEGI SSAGCILDLA VEYNIIEKKG SWFNYQEKKL 

       310        320        330        340        350 
GQGREFVREE LKRNRKLFEE IEKRIYDVIA ANKTPSVHAN ETPQEVPAQT VEA 

« Hide

References

[1]"Comparative genomes of Chlamydia pneumoniae and C. trachomatis."
Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W., Olinger L., Grimwood J., Davis R.W., Stephens R.S.
Nat. Genet. 21:385-389(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CWL029.
[2]"Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39."
Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L. expand/collapse author list , Nelson W.C., DeBoy R.T., Kolonay J.F., McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M.
Nucleic Acids Res. 28:1397-1406(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AR39.
[3]"Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA."
Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T.
Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: J138.
[4]"The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis."
Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TW-183.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE001363 Genomic DNA. Translation: AAD18900.1.
AE002161 Genomic DNA. Translation: AAF38877.1.
BA000008 Genomic DNA. Translation: BAA98970.1.
AE009440 Genomic DNA. Translation: AAP98719.1.
PIRE72037.
H86585.
RefSeqNP_224957.1. NC_000922.1.
NP_300819.1. NC_002491.1.
NP_445647.1. NC_002179.2.
NP_877062.1. NC_005043.1.

3D structure databases

ProteinModelPortalQ9Z7E4.
SMRQ9Z7E4. Positions 4-325.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING115713.CPn0762.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAD18900; AAD18900; CPn_0762.
AAF38877; AAF38877; CP_1110.
AAP98719; AAP98719; CpB0790.
BAA98970; BAA98970; BAA98970.
GeneID1467469.
894964.
919533.
963599.
KEGGcpa:CP1110.
cpj:CPj0762.
cpn:CPn0762.
cpt:CpB0790.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0468.
HOGENOMHOG000264120.
KOK03553.
OMANTYGELI.
OrthoDBEOG6ZKXNZ.

Enzyme and pathway databases

BioCycCPNE115711:GI7B-1147-MONOMER.
CPNE115713:GHEY-796-MONOMER.
CPNE138677:GH8N-788-MONOMER.
CPNE182082:GH4N-815-MONOMER.

Family and domain databases

Gene3D3.30.250.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPMF_00268. RecA.
InterProIPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR020584. DNA_recomb/repair_RecA_CS.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERPTHR22942:SF1. PTHR22942:SF1. 1 hit.
PfamPF00154. RecA. 1 hit.
[Graphical view]
PRINTSPR00142. RECA.
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
SSF54752. SSF54752. 1 hit.
TIGRFAMsTIGR02012. tigrfam_recA. 1 hit.
PROSITEPS00321. RECA_1. 1 hit.
PS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRECA_CHLPN
AccessionPrimary (citable) accession number: Q9Z7E4
Secondary accession number(s): Q9JQ98
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: May 14, 2014
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families