Protein RecA - Chlamydia pneumoniae

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Q9Z7E4 (RECA_CHLPN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 98. History...

Clusters with 100%, 90%, 50% identity |

Documents (1) |

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Protein RecA

Alternative name(s):
Recombinase A

Gene names

Name:	recA
Ordered Locus Names:	CPn_0762, CP_1110, CpB0790

Organism

Chlamydia pneumoniae (Chlamydophila pneumoniae) [Complete proteome] [HAMAP]

Taxonomic identifier

83558 [NCBI]

Taxonomic lineage

Bacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydia

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage By similarity. HAMAP-Rule MF_00268
Subcellular location	Cytoplasm By similarity.
Sequence similarities	Belongs to the RecA family.

Ontologies

Keywords
Biological process	DNA damage DNA recombination DNA repair SOS response
Cellular component	Cytoplasm
Ligand	ATP-binding DNA-binding Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: HAMAP DNA repair Inferred from electronic annotation. Source: HAMAP SOS response Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	ATP binding Inferred from electronic annotation. Source: HAMAP DNA-dependent ATPase activity Inferred from electronic annotation. Source: HAMAP damaged DNA binding Inferred from electronic annotation. Source: HAMAP single-stranded DNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 353

353

Protein RecA HAMAP-Rule MF_00268

PRO_0000122685

Regions

Nucleotide binding

67 – 74

ATP By similarity

Experimental info

Sequence conflict

319

E → K in AAP98719. Ref.4

Sequences

Sequence

Length

Mass (Da)

Tools

Q9Z7E4 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 3D914C27E729A101
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FASTA

353

38,228

        10         20         30         40         50         60 
MNLPDRKKAL EAAVAYIEKQ FGAGSIMSLG RHSATHEIST IKTGALSLDL ALGIHGVPKG 

        70         80         90        100        110        120 
RVIEIFGPES SGKTTLATHI VANAQKMGGV AAYIDAEHAL DPSYASLIGV NIDDLMISQP 

       130        140        150        160        170        180 
DCGEDALSIA ELLARSGAVD VIVIDSVAAL VPKSELEGDI GDVHVGLQAR MMSQALRKLT 

       190        200        210        220        230        240 
ATLSRSQTCA VFINQIREKI GVSFGNPETT TGGRALKFYS SIRLDIRRIG SIKGSDNSDI 

       250        260        270        280        290        300 
GNRIKVKVAK NKLAPPFRIA EFDILFNEGI SSAGCILDLA VEYNIIEKKG SWFNYQEKKL 

       310        320        330        340        350 
GQGREFVREE LKRNRKLFEE IEKRIYDVIA ANKTPSVHAN ETPQEVPAQT VEA

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References

[1]	"Comparative genomes of Chlamydia pneumoniae and C. trachomatis." Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W., Olinger L., Grimwood J., Davis R.W., Stephens R.S. Nat. Genet. 21:385-389(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CWL029.
[2]	"Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39." Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J., Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C., Dodson R.J., Gwinn M.L. Fraser C.M. Nucleic Acids Res. 28:1397-1406(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AR39.
[3]	"Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA." Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K., Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T. Nucleic Acids Res. 28:2311-2314(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: J138.
[4]	"The genome sequence of Chlamydia pneumoniae TW183 and comparison with other Chlamydia strains based on whole genome sequence analysis." Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P., Schneider S., Pohl T., Essig A., Marre R., Melchers K. Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TW-183.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE001363 Genomic DNA. Translation: AAD18900.1. AE002161 Genomic DNA. Translation: AAF38877.1. BA000008 Genomic DNA. Translation: BAA98970.1. AE009440 Genomic DNA. Translation: AAP98719.1.
PIR	E72037. H86585.
RefSeq	NP_224957.1. NC_000922.1. NP_300819.1. NC_002491.1. NP_445647.1. NC_002179.2. NP_877062.1. NC_005043.1.
3D structure databases
ProteinModelPortal	Q9Z7E4.
SMR	Q9Z7E4. Positions 4-325.
ModBase	Search...
Protein-protein interaction databases
STRING	115713.CPn0762.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAD18900; AAD18900; CPn_0762. AAF38877; AAF38877; CP_1110. AAP98719; AAP98719; CpB0790. BAA98970; BAA98970; BAA98970.
GeneID	1467469. 894964. 919533. 963599.
KEGG	cpa:CP1110. cpj:CPj0762. cpn:CPn0762. cpt:CpB0790.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0468.
HOGENOM	HOG000264120.
KO	K03553.
OMA	ANCLMIF.
ProtClustDB	PRK09354.
Enzyme and pathway databases
BioCyc	CPNE115711:GI7B-1108-MONOMER. CPNE115713:GHEY-765-MONOMER. CPNE138677:GH8N-752-MONOMER. CPNE182082:GH4N-787-MONOMER.
Family and domain databases
Gene3D	3.30.250.10. 1 hit.
HAMAP	MF_00268. RecA.
InterPro	IPR003593. AAA+_ATPase. IPR013765. DNA_recomb/repair_RecA. IPR020584. DNA_recomb/repair_RecA_CS. IPR020588. DNA_recomb_RecA/RadB_ATP-bd. IPR023400. RecA_C. IPR020587. RecA_monomer-monomer_interface. [Graphical view]
PANTHER	PTHR22942:SF1. PTHR22942:SF1. 1 hit.
Pfam	PF00154. RecA. 1 hit. [Graphical view]
PRINTS	PR00142. RECA.
SMART	SM00382. AAA. 1 hit. [Graphical view]
SUPFAM	SSF54752. SSF54752. 1 hit.
TIGRFAMs	TIGR02012. tigrfam_recA. 1 hit.
PROSITE	PS00321. RECA_1. 1 hit. PS50162. RECA_2. 1 hit. PS50163. RECA_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RECA_CHLPN

Accession

Primary (citable) accession number: Q9Z7E4
Secondary accession number(s): Q9JQ98

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2000
Last sequence update:	May 1, 1999
Last modified:	May 1, 2013
This is version 98 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Regions

Experimental info

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information

Relevant documents