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Protein

Putative adenylate cyclase 3

Gene

cya3

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP = 3',5'-cyclic AMP + diphosphate.

GO - Molecular functioni

  1. adenylate cyclase activity Source: UniProtKB-EC
  2. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. intracellular signal transduction Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

cAMP biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-1080-MONOMER.
RETL1328306-WGS:GSTH-3658-MONOMER.
RETL1328306-WGS:GSTH-5995-MONOMER.
RETL1328306-WGS:GSTH-6027-MONOMER.
SMEL266834:GJF6-5870-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative adenylate cyclase 3 (EC:4.6.1.1)
Alternative name(s):
ATP pyrophosphate-lyase 3
Adenylyl cyclase 3
Gene namesi
Name:cya3
Synonyms:cyaF5
Ordered Locus Names:RA0861
ORF Names:SMa1583
Encoded oniPlasmid pSymA (megaplasmid 1)0 Publication
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976: Plasmid pSymA

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 587587Putative adenylate cyclase 3PRO_0000195746Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi266834.SMa1583.

Structurei

3D structure databases

ProteinModelPortaliQ9Z3Q0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini12 – 127116Guanylate cyclasePROSITE-ProRule annotationAdd
BLAST
Repeati343 – 37634TPR 1Add
BLAST
Repeati421 – 45434TPR 2Add
BLAST
Repeati455 – 48834TPR 3Add
BLAST
Repeati490 – 52233TPR 4Add
BLAST
Repeati524 – 55633TPR 5Add
BLAST

Sequence similaritiesi

Belongs to the adenylyl cyclase class-3 family.Curated
Contains 1 guanylate cyclase domain.PROSITE-ProRule annotation
Contains 5 TPR repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

eggNOGiCOG0457.
HOGENOMiHOG000012562.
KOiK01768.
OrthoDBiEOG6N945G.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR029787. Nucleotide_cyclase.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00211. Guanylate_cyc. 1 hit.
PF00515. TPR_1. 2 hits.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 4 hits.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
PROSITEiPS50125. GUANYLATE_CYCLASE_2. 1 hit.
PS50005. TPR. 4 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9Z3Q0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKESIRRRL AAILAADAVG YSRLMERDEK STHTLLMARW KEVLEPLVGI
60 70 80 90 100
HQGRVFKRTG DGVLVEFGSA VNAVECAAAL QQAMAAANRD LPEDRAIVLR
110 120 130 140 150
VGVNLGDIMV EDSDLFGDGV NVAARIEALA DPGGVAISDG IHEYVHGRTD
160 170 180 190 200
IDFVDSGYHE VKNIERPVHI WTWSPKDRAR EPPNIAAEPP PQLPAKPSIA
210 220 230 240 250
VLPFDNMSGD PEQGYFADGI TEDIITDLSK VSGLFVIARN SSFAYKGKTP
260 270 280 290 300
DIRKVSRELG VRYVLEGSVR RAANRIRINA QMIDGTTGGH LWAERYDRGL
310 320 330 340 350
EDIFAVQDEV TRTIVNALRV KLTAGEEERR ESRGKVDPEA YDLLVRSRQA
360 370 380 390 400
ILQFNALSSM EARRMLHRVL EIDPGMAAAH ASLSIIALTD FINQWNGATP
410 420 430 440 450
DNLTQALGLA QEAIDTDGSE PQGHYTLALA LSWMRRLDEA EHAAERAIEL
460 470 480 490 500
DPNSANAYTA LGTIRDFQGR HEEALALYTR AHRLDPQFDL SLHFQGRALL
510 520 530 540 550
NLGRFDEAEV AFKRRLLLAP RSDMTRFYLA CLYGRTGRHE EARGYWREVL
560 570 580
GVNPSFSVDH LRRSLPYQDP HLMDRLVEGL REAGVSI
Length:587
Mass (Da):65,307
Last modified:November 2, 2001 - v2
Checksum:i4630AC9816FB615D
GO

Sequence cautioni

The sequence AAK65519.2 differs from that shown. Reason: Erroneous initiation. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti18 – 181A → T in CAB38103 (PubMed:10485295).Curated
Sequence conflicti178 – 1781R → H in CAB38103 (PubMed:10485295).Curated
Sequence conflicti183 – 1831P → L in CAB38103 (PubMed:10485295).Curated
Sequence conflicti196 – 1972KP → S in CAB38103 (PubMed:10485295).Curated
Sequence conflicti251 – 2511D → N in CAB38103 (PubMed:10485295).Curated
Sequence conflicti553 – 5531N → D in CAB38103 (PubMed:10485295).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ225896 Genomic DNA. Translation: CAB38103.1.
AE006469 Genomic DNA. Translation: AAK65519.2. Different initiation.
PIRiE95369.
RefSeqiNP_436107.2. NC_003037.1.

Genome annotation databases

EnsemblBacteriaiAAK65519; AAK65519; SMa1583.
GeneIDi6435284.
KEGGisme:SMa1583.
PATRICi23628232. VBISinMel96828_0895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ225896 Genomic DNA. Translation: CAB38103.1.
AE006469 Genomic DNA. Translation: AAK65519.2. Different initiation.
PIRiE95369.
RefSeqiNP_436107.2. NC_003037.1.

3D structure databases

ProteinModelPortaliQ9Z3Q0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266834.SMa1583.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK65519; AAK65519; SMa1583.
GeneIDi6435284.
KEGGisme:SMa1583.
PATRICi23628232. VBISinMel96828_0895.

Phylogenomic databases

eggNOGiCOG0457.
HOGENOMiHOG000012562.
KOiK01768.
OrthoDBiEOG6N945G.

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-1080-MONOMER.
RETL1328306-WGS:GSTH-3658-MONOMER.
RETL1328306-WGS:GSTH-5995-MONOMER.
RETL1328306-WGS:GSTH-6027-MONOMER.
SMEL266834:GJF6-5870-MONOMER.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR029787. Nucleotide_cyclase.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00211. Guanylate_cyc. 1 hit.
PF00515. TPR_1. 2 hits.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 4 hits.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
PROSITEiPS50125. GUANYLATE_CYCLASE_2. 1 hit.
PS50005. TPR. 4 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The eff-482 locus of Sinorhizobium meliloti CXM1-105 that influences symbiotic effectiveness consists of three genes encoding an endoglycanase, a transcriptional regulator and an adenylate cyclase."
    Sharypova L.A., Yurgel S.N., Keller M., Simarov B.V., Puehler A., Becker A.
    Mol. Gen. Genet. 261:1032-1044(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: CXM1-105.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.

Entry informationi

Entry nameiCYA3_RHIME
AccessioniPrimary (citable) accession number: Q9Z3Q0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 2, 2001
Last modified: January 7, 2015
This is version 102 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.