Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9Z2X9 (Q9Z2X9_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
BEIGE EMBL BAA34688.1
Gene names
Name:Lyst RGD 621837
Synonyms:beige EMBL BAA34688.1
OrganismRattus norvegicus (Rat) EMBL BAA34688.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length3788 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   DomainRepeat RuleBase RU003532
WD repeat RuleBase RU000362
Gene Ontology (GO)
   Biological_processpigmentation

Inferred from mutant phenotype PubMed 12638234. Source: RGD

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9Z2X9 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: E51FB90F0E2E6550

FASTA3,788426,605
        10         20         30         40         50         60 
MSTDSNSLAR EFLIDVNQLC NAVVQRAEAR EEEEEETHMA TLGQYLVHGR GFLLLTKLNS 

        70         80         90        100        110        120 
IIYQALTCRE ELLTLLLSLL PLVWKIPVQE HQATDFYLPL SSDIILSKEK NSSLQKSTQG 

       130        140        150        160        170        180 
KLYLEGSAPA SQVSALVNLF RKIRRQRKST HRYSERDARK TQLSTSDSEG NSDERNTVVR 

       190        200        210        220        230        240 
KHRRFHTLPR LLTESPKEDH FVAKLDPSAT KEQVLSDTMS LENSREVILR QDSNGDILSE 

       250        260        270        280        290        300 
PAALSILSNM NNSPFDLCHV LLSLLEKVCK FDIALNHNSS LALSVVPTLT EFLAGFGDCC 

       310        320        330        340        350        360 
NQSDTLERQL VSAGWTEEPV ALVQRMLFRT VLHLMSVDVS TAEAMPESLR KNLTELLRAA 

       370        380        390        400        410        420 
LKIRACLEKQ PDPFSPRQKK TLQEIQEGFV FSKYLHRALL LPELLEGVLQ LLISCLQSAA 

       430        440        450        460        470        480 
SNPFYFSQAM DLVQEFIQHQ GFNLFETAVL QMEWLLSRDA VPSEAAEHLK AVINSVIKIM 

       490        500        510        520        530        540 
STVKKVKSEQ LHHSMCTRKR HRRCEYSHFM QHHRDLSGLL VSAFKNQLSE SPFEETAEGD 

       550        560        570        580        590        600 
VQYPERCCCI AVCAHQCLRL LQQVSLQTTC IQILSGVHSV GICCCMDPKS VIVPLLHAFK 

       610        620        630        640        650        660 
LPALKNFQQH ILNVLSKLLL DQLGGAEISQ QIKKAACNIC TVDSDQLAKL GETLQGTLCG 

       670        680        690        700        710        720 
AGPSCGLPSP SYRFQGILPS SGSEDFLWKW DALEAYQNFI FQEDRLHNTQ IASHICNLIQ 

       730        740        750        760        770        780 
KGNVIVQWKL YNYIFNPVLQ RGVELVHHCQ QLSITSAQTH MSSQLKQYLP QEVLQIYLKT 

       790        800        810        820        830        840 
LPILLKSRVI RDLFLSCNGV NHIIELNYLD GIRSHSLKAF ETLIVSLGEQ QKRAAVPGVD 

       850        860        870        880        890        900 
GLDIQQELSS LSVGPSLHKQ QASTDSPCSL RKFYASLRDT DPKKRKTVHQ DAHINTINLF 

       910        920        930        940        950        960 
LCVAFLCVSK EADSDRESAN ESEDTSGYDS TASEPLSHML PRLSLENVVL PSPECLHHAA 

       970        980        990       1000       1010       1020 
DIWSMCRWIY MLNSVFQKQF HRLGGFQVCH ELIFMIIQKL FRSHTEDQGR RQGEMSVNKN 

      1030       1040       1050       1060       1070       1080 
QGLMRISQPE MILKEDVSSS TAPEPGFLKK SADRVSELES QHMLPTSAEQ ILATKSIPGE 

      1090       1100       1110       1120       1130       1140 
AKTFMNQESE TCLQSIRLLE SLLAICLHSA RASQQKMELE LPSQSLSLEN ILCELRDHLS 

      1150       1160       1170       1180       1190       1200 
QSKVAETELA KPLFDALLRV ALGNHSADLD PGDTVTEKSH PSEEVLSQPG DFSEEAEDSQ 

      1210       1220       1230       1240       1250       1260 
CCSLKLLGEE EGYEADSESN PEDGETQDDG VELPEAEGFS GSIVPNNLLE SLTHGEIIYP 

      1270       1280       1290       1300       1310       1320 
EICILGLNLL SGSKAKLDVL AHVFESFLKI ARQKEKNISL LMQQGTVKIL LGGFLNVLTQ 

      1330       1340       1350       1360       1370       1380 
TNSDFQACQR VLVDLLVSLM SSRMSSEDLT LLLRIFLEKS PCTEILLHGI QKIVESDFTM 

      1390       1400       1410       1420       1430       1440 
SPSQYLTFPL LHTPSLSNGV SSQKPPGILN SKALGLLRRA RISRGKKEAD RESFPYRLLS 

      1450       1460       1470       1480       1490       1500 
SWDIAPIHLP WLGQNCWPHL SEGFSVSLWF NVEYIHESES AAERGKKVKK RNKPSVLEDS 

      1510       1520       1530       1540       1550       1560 
SFERAEGDRP EVTESISPSD RLIEDGCIHL ISLGSKALMI QVWADPHSGT FIFRVCVDSN 

      1570       1580       1590       1600       1610       1620 
DDMKAVTLAQ VESQENIFFP SSWQHLILTY IQHPQGKKNV HGEISIWVSG QRKTDVILDF 

      1630       1640       1650       1660       1670       1680 
VLPRKTSLSS DSNKTFCMIG HCLTSQEEFL QLAGKWDLGN LLLFNGAKIG SQEAFYLYAC 

      1690       1700       1710       1720       1730       1740 
GPNYTSIMPC KYGKPVVDYS KYINKEILRC DEIRDLFMTK KDVDVGLLIE SLSVVYTTYC 

      1750       1760       1770       1780       1790       1800 
PAQYTIYEPV IRLKGQVKTQ LSQRPFSSKE AQSILLEPSQ LKSLQPTECK TIQGILHEIG 

      1810       1820       1830       1840       1850       1860 
GAGIFVFLFA RVVELSSCEE TQALALRVIL SLIKYSQQRT HELENCNGLS MIHQVLVKQK 

      1870       1880       1890       1900       1910       1920 
CVVGFHILKT LLEGCCGEEV IFVNEHGEFK LDVESHAIIQ DVKLLQELLL DWKIWNKAEQ 

      1930       1940       1950       1960       1970       1980 
GVWETLLAAL EVLIRVEHQQ QQFNITQLLN ARVVHHFLLT CQVLQEHREG QLTSMPREVC 

      1990       2000       2010       2020       2030       2040 
RSFVKIIAEV LGSPPDLELL SVIFNFLLAV HPPTNTYVCH NPANFNFSLH IDGKIFHEKV 

      2050       2060       2070       2080       2090       2100 
RSIMYLRHSS SGGQSFPSPG FMVISPSAFT ASPPEGTSSS NIVPQRMAAQ MVRSRSLPAF 

      2110       2120       2130       2140       2150       2160 
PTYSPLMQAQ KLAGSLVFSV DKLQNIADAS PEKRNPLGSP YTLKKSKEEA FISSCESAKT 

      2170       2180       2190       2200       2210       2220 
VCEMEAFLAA QASANGVSRG SLRFPMARID HKDWGTEHRS YDDSPGDESY PRRPDDLKGL 

      2230       2240       2250       2260       2270       2280 
ASFQRSHSTI ASLGLAFPSQ NGSAVASRWP SLVDRNADDW ENFTFSPAYE ANYNRATSTH 

      2290       2300       2310       2320       2330       2340 
SAIEDCLIPI CCGFYELLSG VLLVLPDAML EDVMDRIIQA DILLVLVNHP SPAIQQGVIK 

      2350       2360       2370       2380       2390       2400 
LLQAYINRAS KEQKDKFLKN RGFSLLANQL YLHRGTQELL ECFIEMFFGR PFGLDEEFDL 

      2410       2420       2430       2440       2450       2460 
DEMKHMELFQ KWSVIPILGL IETSLYDNIL LHNSLLLLLQ VLNSCSKVAD MLLDNGLLYV 

      2470       2480       2490       2500       2510       2520 
LCNTVAALNG LEKNIPLNEF RLLACDIQQL FIAVTIHACS SSGSQYFRVI EDPIVLIGDL 

      2530       2540       2550       2560       2570       2580 
HNSKNKRTQN MALALQLRVL QAALEFIRST ANHDSESPLD AVQSPSAYHH SVPQKRRSIA 

      2590       2600       2610       2620       2630       2640 
GPRKFPLAQT ESLLMKMRSV ASDELHSMMQ RRMSQEHPSQ ASEAELAQRL QRLTILAVNR 

      2650       2660       2670       2680       2690       2700 
IIYQELNSDI IDILRTPENT SQSKTSVSQT ETSEEDVHYE QPSVSNPFQK EMFTYLLDGF 

      2710       2720       2730       2740       2750       2760 
KISIGSSKTG TSKQQWTKIL GSSKETLRVQ LGRLLAHILS PTHTVQERKQ ILEIVHEPAH 

      2770       2780       2790       2800       2810       2820 
QDILRDCLSP SPQHGAKLVL YLSELIHNHQ DELNEVEMDT AELLMNALKL CGHKCVPPSA 

      2830       2840       2850       2860       2870       2880 
PSKPELIKII KEEQKKYDSE ESVSKVAWQK TVSNNQQSLF QRLDLKSKDI SKIAADITQA 

      2890       2900       2910       2920       2930       2940 
VSLSQGLERK KVIQHIRGMY KVDLSASRHW QELIQQLTHD RAVWYDPIYY PTSWQLDPTE 

      2950       2960       2970       2980       2990       3000 
GPNRERRRLQ RCYLTIPNKY LLRDRQKSEG VLKPPLSYLF EDKTHSSFSS TVKDKAASES 

      3010       3020       3030       3040       3050       3060 
NRVNRRCISV APSRETAGEL LLGKCGMYFV EDNASDTVES SSLQGELEPA SFSWTYEEIK 

      3070       3080       3090       3100       3110       3120 
EIHRRWWQLR DNAVEIFLTN GRTLLLAFDN TKVRDDVYQS ILTNNLPSLL EYGNITALTN 

      3130       3140       3150       3160       3170       3180 
LWYTGQITNF EYLTHLNKHA GRSFNDLMQY PVFPFILSDY VSETLDLNDP SIYRNLSKPI 

      3190       3200       3210       3220       3230       3240 
AVQYKEKEDR YVDTYKYLEE EFRKGAREDD PMPPVQPYHY GSHYSNSGTV LHFLVRMPPF 

      3250       3260       3270       3280       3290       3300 
TKMFLAYQDQ SFDIPDRTFH STNTTWRLSS FESMTDVKEL IPEFFYLPEF LVNREGFDFG 

      3310       3320       3330       3340       3350       3360 
VRQNGERVNH VNLPPWARND PRLFILIHRQ ALESDHVSQN ICHWIDLVFG YKQKGKASVQ 

      3370       3380       3390       3400       3410       3420 
AINVFHPATY FGMDVSAVED PVQRRALETM IKTYGQTPRQ LFHTAHASRP GAKLNIEGEL 

      3430       3440       3450       3460       3470       3480 
PAAVGLLVQF AFRETREPIK EITYPSPLSW IKGLKWGEYV GSPSAPVPVV CFSQPHGERF 

      3490       3500       3510       3520       3530       3540 
GSLQALPTRA ICGLSQNFCL LMTYSKEQGV RSMNNTDIQW SAILSWGYAD NILRLKSKQS 

      3550       3560       3570       3580       3590       3600 
EPPINFIQSS QQHQVTSCAW VPDSCQLFTG SKCGVITAYT NRFTSGTPSE IEMESQMHLY 

      3610       3620       3630       3640       3650       3660 
GHTEEITSLC VCKPYSVMIS VSRDGTCIVW DLNRLCYVQS LAGHKNPVTA VSASETSGDI 

      3670       3680       3690       3700       3710       3720 
ATVCDSAGGG SDLRLWTVNG DLVGHVHCRE IICSVAFSNQ PEGVSINVIA GGLENGIVRL 

      3730       3740       3750       3760       3770       3780 
WSTWDLKPVR EITFPKSNKP IISLTFSCDG HHLYTANSDG TVIAWCRKDQ QRVKQPMFYS 


FLSSYAAG

« Hide

References

[1]Mori M., Nishikawa T., Higuchi K., Nishimura M.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DA EMBL BAA34688.1.
Tissue: Spleen EMBL BAA34688.1.
[2]"Deletion in the beige gene of the beige rat owing to recombination between LINE1s."
Mori M., Nishikawa T., Higuchi K., Nishimura M.
Mamm. Genome 10:692-695(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DA EMBL BAA34688.1.
Tissue: Spleen EMBL BAA34688.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB020019 mRNA. Translation: BAA34688.1.
IPIIPI00210375.
PIRT13960.
RefSeqNP_445970.1. NM_053518.1.
UniGeneRn.44274.

3D structure databases

ProteinModelPortalQ9Z2X9.
ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000061279.

PTM databases

PhosphoSiteQ9Z2X9.

Proteomic databases

PaxDbQ9Z2X9.
PRIDEQ9Z2X9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID85419.
KEGGrno:85419.
UCSCRGD:621837. rat.

Organism-specific databases

CTD1130.
RGD621837. Lyst.

Phylogenomic databases

eggNOGCOG2319.
HOVERGENHBG006300.

Gene expression databases

GenevestigatorQ9Z2X9.

Family and domain databases

Gene3D1.10.1540.10. 1 hit.
2.130.10.10. 1 hit.
2.30.29.40. 1 hit.
InterProIPR000409. BEACH_dom.
IPR023362. PH-BEACH_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF02138. Beach. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
SMARTSM01026. Beach. 1 hit.
SM00320. WD40. 4 hits.
[Graphical view]
SUPFAMSSF81837. Beige_BEACH. 1 hit.
SSF50978. WD40_like. 1 hit.
PROSITEPS50197. BEACH. 1 hit.
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio617494.

Entry information

Entry nameQ9Z2X9_RAT
AccessionPrimary (citable) accession number: Q9Z2X9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: May 29, 2013
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info