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Protein

Ubiquitin-like protein 3

Gene

Ubl3

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin-like protein 3
Alternative name(s):
Membrane-anchored ubiquitin-fold protein
Short name:
MUB
Short name:
MmMUB
Protein HCG-1
Gene namesi
Name:Ubl3
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:1344373. Ubl3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001148631 – 114Ubiquitin-like protein 3Add BLAST114
PropeptideiPRO_0000248184115 – 117Removed in mature formCurated3

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi113S-palmitoyl cysteine1 Publication1
Modified residuei114Cysteine methyl esterCurated1
Lipidationi114S-geranylgeranyl cysteine1 Publication1

Keywords - PTMi

Lipoprotein, Methylation, Palmitate, Prenylation

Proteomic databases

EPDiQ9Z2M6.
MaxQBiQ9Z2M6.
PaxDbiQ9Z2M6.
PRIDEiQ9Z2M6.

PTM databases

iPTMnetiQ9Z2M6.
PhosphoSitePlusiQ9Z2M6.
SwissPalmiQ9Z2M6.

Expressioni

Gene expression databases

BgeeiENSMUSG00000001687.
CleanExiMM_UBL3.
GenevisibleiQ9Z2M6. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000078303.

Structurei

Secondary structure

1117
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 15Combined sources9
Beta strandi17 – 19Combined sources3
Beta strandi21 – 26Combined sources6
Helixi32 – 41Combined sources10
Beta strandi42 – 44Combined sources3
Turni55 – 57Combined sources3
Beta strandi58 – 62Combined sources5
Beta strandi65 – 67Combined sources3
Turni73 – 77Combined sources5
Beta strandi83 – 90Combined sources8
Beta strandi95 – 97Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WGHNMR-A1-103[»]
ProteinModelPortaliQ9Z2M6.
SMRiQ9Z2M6.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9Z2M6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 88Ubiquitin-likePROSITE-ProRule annotationAdd BLAST79

Sequence similaritiesi

Contains 1 ubiquitin-like domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IVZB. Eukaryota.
ENOG4111N2D. LUCA.
GeneTreeiENSGT00390000004952.
HOGENOMiHOG000253908.
HOVERGENiHBG054980.
InParanoidiQ9Z2M6.
OMAiMHLVTRE.
OrthoDBiEOG091G0VZB.
PhylomeDBiQ9Z2M6.
TreeFamiTF314489.

Family and domain databases

InterProiIPR017000. MUB.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PIRSFiPIRSF032572. MUB. 1 hit.
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9Z2M6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSHVPADMI NLRLILVSGK TKEFLFSPND SASDIAKHVY DNWPMDWEEE
60 70 80 90 100
QVSSPNILRL IYQGRFLHGN VTLGALKLPF GKTTVMHLVA RETLPEPNSQ
110
GQRNREKTGE SNCCVIL
Length:117
Mass (Da):13,180
Last modified:May 1, 1999 - v1
Checksum:i2EB3A5102AD06F2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF044222 mRNA. Translation: AAD02324.1.
AK145952 mRNA. Translation: BAE26780.1.
BC024507 mRNA. Translation: AAH24507.1.
BC025595 mRNA. Translation: AAH25595.1.
BC043729 mRNA. Translation: AAH43729.1.
CCDSiCCDS39403.1.
RefSeqiNP_036038.1. NM_011908.2.
XP_006504895.1. XM_006504832.3.
UniGeneiMm.21846.
Mm.488617.

Genome annotation databases

EnsembliENSMUST00000079324; ENSMUSP00000078303; ENSMUSG00000001687.
ENSMUST00000164904; ENSMUSP00000131049; ENSMUSG00000001687.
ENSMUST00000201595; ENSMUSP00000144073; ENSMUSG00000001687.
GeneIDi24109.
KEGGimmu:24109.
UCSCiuc009aou.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF044222 mRNA. Translation: AAD02324.1.
AK145952 mRNA. Translation: BAE26780.1.
BC024507 mRNA. Translation: AAH24507.1.
BC025595 mRNA. Translation: AAH25595.1.
BC043729 mRNA. Translation: AAH43729.1.
CCDSiCCDS39403.1.
RefSeqiNP_036038.1. NM_011908.2.
XP_006504895.1. XM_006504832.3.
UniGeneiMm.21846.
Mm.488617.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WGHNMR-A1-103[»]
ProteinModelPortaliQ9Z2M6.
SMRiQ9Z2M6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000078303.

PTM databases

iPTMnetiQ9Z2M6.
PhosphoSitePlusiQ9Z2M6.
SwissPalmiQ9Z2M6.

Proteomic databases

EPDiQ9Z2M6.
MaxQBiQ9Z2M6.
PaxDbiQ9Z2M6.
PRIDEiQ9Z2M6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000079324; ENSMUSP00000078303; ENSMUSG00000001687.
ENSMUST00000164904; ENSMUSP00000131049; ENSMUSG00000001687.
ENSMUST00000201595; ENSMUSP00000144073; ENSMUSG00000001687.
GeneIDi24109.
KEGGimmu:24109.
UCSCiuc009aou.1. mouse.

Organism-specific databases

CTDi5412.
MGIiMGI:1344373. Ubl3.

Phylogenomic databases

eggNOGiENOG410IVZB. Eukaryota.
ENOG4111N2D. LUCA.
GeneTreeiENSGT00390000004952.
HOGENOMiHOG000253908.
HOVERGENiHBG054980.
InParanoidiQ9Z2M6.
OMAiMHLVTRE.
OrthoDBiEOG091G0VZB.
PhylomeDBiQ9Z2M6.
TreeFamiTF314489.

Miscellaneous databases

ChiTaRSiUbl3. mouse.
EvolutionaryTraceiQ9Z2M6.
PROiQ9Z2M6.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000001687.
CleanExiMM_UBL3.
GenevisibleiQ9Z2M6. MM.

Family and domain databases

InterProiIPR017000. MUB.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PIRSFiPIRSF032572. MUB. 1 hit.
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiUBL3_MOUSE
AccessioniPrimary (citable) accession number: Q9Z2M6
Secondary accession number(s): A4FTW0, Q3UKM1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2004
Last sequence update: May 1, 1999
Last modified: November 2, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.