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Q9Z2A1

- Q9Z2A1_RAT

UniProt

Q9Z2A1 - Q9Z2A1_RAT

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Protein
Submitted name:

Patched

Gene

Ptch1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hedgehog receptor activity Source: InterPro

GO - Biological processi

  1. response to drug Source: RGD
  2. response to estradiol Source: RGD
  3. response to mechanical stimulus Source: RGD
  4. response to organic cyclic compound Source: RGD
  5. response to retinoic acid Source: RGD
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PatchedImported
Gene namesi
Name:Ptch1Imported
Synonyms:ptcImported, PtchImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi621425. Ptch1.

Subcellular locationi

GO - Cellular componenti

  1. axonal growth cone Source: RGD
  2. dendritic growth cone Source: RGD
  3. integral component of membrane Source: InterPro
  4. postsynaptic density Source: RGD
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ9Z2A1.

Structurei

3D structure databases

ProteinModelPortaliQ9Z2A1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG003801.
PhylomeDBiQ9Z2A1.

Family and domain databases

InterProiIPR000731. SSD.
IPR004766. TM_rcpt_patched.
[Graphical view]
TIGRFAMsiTIGR00918. 2A060602. 1 hit.
PROSITEiPS50156. SSD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9Z2A1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MASAGNAAGA LGRQAGGGRR RRTGGPHRAA PDRDYLHRPS YCDAAFAMEQ
60 70 80 90 100
ISKGKATGRK APLWLRAKFQ RLLFKLGCYI QKDCGKFLVV GLLIFGAFAV
110 120 130 140 150
GLKAANLETN VEELWVEVGG RVSRELNYTR QKIGEEAMFN PQLMIQTPKE
160 170 180 190 200
EGANVLTTEA LLQHLDSALQ ASRVHVYMYN RQWKLEHLCY KSGELITETG
210 220 230 240 250
YMDQIIEYLY PCLIITPLDC FWEGAKLQSG TAYLLGKPPL RWTNFDPLEF
260 270 280 290 300
LEELKKINYQ VDSWEEMLNK AEVGHGYMDR PCLNPADPDC PATAPNKNST
310 320 330 340 350
KPLDVALVLN GGCQGLSRKY MHWQEELIVG GTVKNATGKL VSAHALQTMF
360 370 380 390 400
QLMTPKQMYE HFRGYDYVSH INWNEDRAAA ILEAWQRTYV EVVHQSVAPN
410 420 430 440 450
STQKVLSFTT RTLDDILKSF SDVSVIRVAS GYLLMLAYAC LTMLRWDCSK
460 470 480 490 500
SQGAVGLAGV LLVALSVAAG LGLCSLIGIS FNAATTQVLP FLALGVGVDD
510 520 530 540 550
VFLLAHAFSE TGQNKRIPIE DRTGECLKRT GASVALTSIS NVTAFFMAAL
560 570 580 590 600
IPIPALRAFS LQAAVVVVFN FAMVLLIFPA ILSMDLYRRE DRRLDIFCCF

TSPCVSLV
Length:608
Mass (Da):67,328
Last modified:May 1, 1999 - v1
Checksum:i73F505A1512EE9C5
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei608 – 6081Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF079162 mRNA. Translation: AAC99398.1.
UniGeneiRn.102312.

Genome annotation databases

UCSCiRGD:621425. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF079162 mRNA. Translation: AAC99398.1 .
UniGenei Rn.102312.

3D structure databases

ProteinModelPortali Q9Z2A1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:621425. rat.

Organism-specific databases

RGDi 621425. Ptch1.

Phylogenomic databases

HOVERGENi HBG003801.
PhylomeDBi Q9Z2A1.

Gene expression databases

Genevestigatori Q9Z2A1.

Family and domain databases

InterProi IPR000731. SSD.
IPR004766. TM_rcpt_patched.
[Graphical view ]
TIGRFAMsi TIGR00918. 2A060602. 1 hit.
PROSITEi PS50156. SSD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Partial cDNA sequence of rat ptc gene."
    Zhao P., Roy N.K., Xu G., Burns F.J.
    Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague DawleyImported.
    Tissue: HypothalamusImported.

Entry informationi

Entry nameiQ9Z2A1_RAT
AccessioniPrimary (citable) accession number: Q9Z2A1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)