Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9Z2A1 (Q9Z2A1_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Patched EMBL AAC99398.1
Gene names
Name:Ptch1 RGD 621425
Synonyms:ptc EMBL AAC99398.1, Ptch RGD 621425
OrganismRattus norvegicus (Rat) EMBL AAC99398.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length608 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue6081 EMBL AAC99398.1

Sequences

Sequence LengthMass (Da)Tools
Q9Z2A1 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 73F505A1512EE9C5

FASTA60867,328
        10         20         30         40         50         60 
MASAGNAAGA LGRQAGGGRR RRTGGPHRAA PDRDYLHRPS YCDAAFAMEQ ISKGKATGRK 

        70         80         90        100        110        120 
APLWLRAKFQ RLLFKLGCYI QKDCGKFLVV GLLIFGAFAV GLKAANLETN VEELWVEVGG 

       130        140        150        160        170        180 
RVSRELNYTR QKIGEEAMFN PQLMIQTPKE EGANVLTTEA LLQHLDSALQ ASRVHVYMYN 

       190        200        210        220        230        240 
RQWKLEHLCY KSGELITETG YMDQIIEYLY PCLIITPLDC FWEGAKLQSG TAYLLGKPPL 

       250        260        270        280        290        300 
RWTNFDPLEF LEELKKINYQ VDSWEEMLNK AEVGHGYMDR PCLNPADPDC PATAPNKNST 

       310        320        330        340        350        360 
KPLDVALVLN GGCQGLSRKY MHWQEELIVG GTVKNATGKL VSAHALQTMF QLMTPKQMYE 

       370        380        390        400        410        420 
HFRGYDYVSH INWNEDRAAA ILEAWQRTYV EVVHQSVAPN STQKVLSFTT RTLDDILKSF 

       430        440        450        460        470        480 
SDVSVIRVAS GYLLMLAYAC LTMLRWDCSK SQGAVGLAGV LLVALSVAAG LGLCSLIGIS 

       490        500        510        520        530        540 
FNAATTQVLP FLALGVGVDD VFLLAHAFSE TGQNKRIPIE DRTGECLKRT GASVALTSIS 

       550        560        570        580        590        600 
NVTAFFMAAL IPIPALRAFS LQAAVVVVFN FAMVLLIFPA ILSMDLYRRE DRRLDIFCCF 


TSPCVSLV

« Hide

References

[1]"Partial cDNA sequence of rat ptc gene."
Zhao P., Roy N.K., Xu G., Burns F.J.
Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague Dawley EMBL AAC99398.1.
Tissue: Hypothalamus EMBL AAC99398.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF079162 mRNA. Translation: AAC99398.1.
IPIIPI00396901.
UniGeneRn.102312.

3D structure databases

ProteinModelPortalQ9Z2A1.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:621425. rat.

Organism-specific databases

RGD621425. Ptch1.

Phylogenomic databases

HOVERGENHBG003801.
InParanoidQ9Z2A1.

Gene expression databases

GenevestigatorQ9Z2A1.

Family and domain databases

InterProIPR000731. SSD.
IPR004766. TM_rcpt_patched.
[Graphical view]
TIGRFAMsTIGR00918. 2A060602. 1 hit.
PROSITEPS50156. SSD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9Z2A1_RAT
AccessionPrimary (citable) accession number: Q9Z2A1
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: April 3, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info