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Q9Z2A1

- Q9Z2A1_RAT

UniProt

Q9Z2A1 - Q9Z2A1_RAT

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Protein
Submitted name:

Patched

Gene
Ptch1, ptc, Ptch
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hedgehog receptor activity Source: InterPro

GO - Biological processi

  1. response to drug Source: RGD
  2. response to estradiol Source: RGD
  3. response to mechanical stimulus Source: RGD
  4. response to organic cyclic compound Source: RGD
  5. response to retinoic acid Source: RGD
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PatchedImported
Gene namesi
Name:Ptch1Imported
Synonyms:ptcImported, PtchImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi621425. Ptch1.

Subcellular locationi

GO - Cellular componenti

  1. axonal growth cone Source: RGD
  2. dendritic growth cone Source: RGD
  3. integral component of membrane Source: InterPro
  4. postsynaptic density Source: RGD
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ9Z2A1.

Structurei

3D structure databases

ProteinModelPortaliQ9Z2A1.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG003801.
InParanoidiQ9Z2A1.
PhylomeDBiQ9Z2A1.

Family and domain databases

InterProiIPR000731. SSD.
IPR004766. TM_rcpt_patched.
[Graphical view]
TIGRFAMsiTIGR00918. 2A060602. 1 hit.
PROSITEiPS50156. SSD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9Z2A1-1 [UniParc]FASTAAdd to Basket

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MASAGNAAGA LGRQAGGGRR RRTGGPHRAA PDRDYLHRPS YCDAAFAMEQ    50
ISKGKATGRK APLWLRAKFQ RLLFKLGCYI QKDCGKFLVV GLLIFGAFAV 100
GLKAANLETN VEELWVEVGG RVSRELNYTR QKIGEEAMFN PQLMIQTPKE 150
EGANVLTTEA LLQHLDSALQ ASRVHVYMYN RQWKLEHLCY KSGELITETG 200
YMDQIIEYLY PCLIITPLDC FWEGAKLQSG TAYLLGKPPL RWTNFDPLEF 250
LEELKKINYQ VDSWEEMLNK AEVGHGYMDR PCLNPADPDC PATAPNKNST 300
KPLDVALVLN GGCQGLSRKY MHWQEELIVG GTVKNATGKL VSAHALQTMF 350
QLMTPKQMYE HFRGYDYVSH INWNEDRAAA ILEAWQRTYV EVVHQSVAPN 400
STQKVLSFTT RTLDDILKSF SDVSVIRVAS GYLLMLAYAC LTMLRWDCSK 450
SQGAVGLAGV LLVALSVAAG LGLCSLIGIS FNAATTQVLP FLALGVGVDD 500
VFLLAHAFSE TGQNKRIPIE DRTGECLKRT GASVALTSIS NVTAFFMAAL 550
IPIPALRAFS LQAAVVVVFN FAMVLLIFPA ILSMDLYRRE DRRLDIFCCF 600
TSPCVSLV 608
Length:608
Mass (Da):67,328
Last modified:May 1, 1999 - v1
Checksum:i73F505A1512EE9C5
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei608 – 6081Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF079162 mRNA. Translation: AAC99398.1.
UniGeneiRn.102312.

Genome annotation databases

UCSCiRGD:621425. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF079162 mRNA. Translation: AAC99398.1 .
UniGenei Rn.102312.

3D structure databases

ProteinModelPortali Q9Z2A1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:621425. rat.

Organism-specific databases

RGDi 621425. Ptch1.

Phylogenomic databases

HOVERGENi HBG003801.
InParanoidi Q9Z2A1.
PhylomeDBi Q9Z2A1.

Gene expression databases

Genevestigatori Q9Z2A1.

Family and domain databases

InterProi IPR000731. SSD.
IPR004766. TM_rcpt_patched.
[Graphical view ]
TIGRFAMsi TIGR00918. 2A060602. 1 hit.
PROSITEi PS50156. SSD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Partial cDNA sequence of rat ptc gene."
    Zhao P., Roy N.K., Xu G., Burns F.J.
    Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague DawleyImported.
    Tissue: HypothalamusImported.

Entry informationi

Entry nameiQ9Z2A1_RAT
AccessioniPrimary (citable) accession number: Q9Z2A1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: July 9, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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