Reviewed,
UniProtKB/Swiss-Prot Q9Z1S3 (GRP1_MOUSE)
Last modified
January 19, 2010.
Version 80.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: RAS guanyl-releasing protein 1 Alternative name(s): Ras guanyl-releasing protein Calcium and DAG-regulated guanine nucleotide exchange factor II Short name=CalDAG-GEFII | ||||
| Gene names |
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| Organism | Mus musculus (Mouse) | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 795 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Functions as a diacylglycerol (DAG)-regulated nucleotide exchange factor specifically activating Ras through the exchange of bound GDP for GTP. Activates the Erk/MAP kinase cascade. Couples T-lymphocytes and B-lymphocytes antigen receptors to the activation of Ras. Hence, regulates T-cells and B-cells development, homeostasis and differentiation. Functions also in FcERI-evoked degranulation and cytokine secretion by mast cells, regulating allergic responses. May also function in other cell types differentiation. Proto-oncogene which promotes T-cell lymphomagenesis when its expression is deregulated. Ref.5 Ref.6 Ref.7 Ref.8 Ref.9 Ref.10 Ref.11 Ref.12 Ref.13 Ref.14 Ref.15 Ref.17 Ref.18 |
| Enzyme regulation | Probably regulated by calcium. Regulated by PLC gamma, DGKA, DGKZ and by F-actin polymerization By similarity. |
| Subunit structure | Forms a signaling complex with DGKZ and HRAS. Interacts with F-actin. Interacts with SKAP1 By similarity. |
| Subcellular location | Cytoplasm › cytosol By similarity. Cell membrane; Peripheral membrane protein By similarity. Golgi apparatus membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheral membrane protein By similarity. Note: Found both in the cytosol and associated with membranes. Relocalization to the cell membrane upon activation is F-actin-dependent By similarity. Translocates to the Golgi in response to phorbol ester or nerve growth factor. Localizes to somata and dendrites but not to axons of hippocampal pyramidal cells By similarity. Ref.5 Ref.9 Ref.11 Ref.16 Ref.20 |
| Tissue specificity | Detected in spleen and thymus. Expressed by mature thymocytes and to a lower extent by bone marrow-derived mast cells (at protein level). Detected in B-cells and keratinocytes (at protein level). Ref.5 Ref.6 Ref.7 Ref.9 Ref.12 Ref.18 |
| Induction | Up-regulated at the double-negative to double-positive transition during thymocyte development. Down-regulated by 12-O-tetradecanoylphorbol-13-acetate (TPA). Ref.9 Ref.10 |
| Domain | The phorbol-ester/DAG-type zinc finger is the principal mediator of the targeting to membranes and is required for functional activation through DAG-binding. |
| Disruption phenotype | Mice fail to mount anaphylactic allergic reactions and display chronic T-cell immunodeficiencies. Lag (lymphoproliferation-autoimmunity-glomerulonephritis) mice do not express Rasgrp1 and display a systemic lupus erythematosus-like phenotype. Ref.6 Ref.15 Ref.19 |
| Sequence similarities | Belongs to the RASGRP family. Contains 2 EF-hand domains. Contains 1 N-terminal Ras-GEF domain. Contains 1 phorbol-ester/DAG-type zinc finger. Contains 1 Ras-GEF domain. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 795 | 795 | RAS guanyl-releasing protein 1 | PRO_0000316979 | |||||
Regions | |||||||||
| Domain | 53 – 176 | 124 | N-terminal Ras-GEF | ||||||
| Domain | 205 – 436 | 232 | Ras-GEF | ||||||
| Domain | 470 – 505 | 36 | EF-hand 1 | ||||||
| Domain | 497 – 532 | 36 | EF-hand 2 | ||||||
| Calcium binding | 483 – 494 | 12 | 1 Potential | ||||||
| Calcium binding | 510 – 521 | 12 | 2 Potential | ||||||
| Zinc finger | 541 – 591 | 51 | Phorbol-ester/DAG-type | ||||||
| Region | 57 – 110 | 54 | Ras exchanger motif region; required for transforming activity | ||||||
| Region | 686 – 694 | 9 | Suppress the PT region-mediated translocation to plasma membrane | ||||||
| Region | 717 – 795 | 79 | PT region; mediates the BCR-dependent translocation to plasma membrane | ||||||
| Coiled coil | 738 – 779 | 42 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 184 | 1 | Phosphothreonine; by PKC By similarity | ||||||
| Modified residue | 694 | 1 | Phosphoserine By similarity | ||||||
Experimental info | |||||||||
| Mutagenesis | 271 | 1 | R → E: Loss of function and transforming activity. Ref.5 Ref.12 | ||||||
| Sequence conflict | 171 | 1 | T → R in BAE24718. Ref.2 | ||||||
| Sequence conflict | 472 | 1 | Q → K in BAE20439. Ref.2 | ||||||
| Sequence conflict | 485 | 1 | D → E in BAE20439. Ref.2 | ||||||
| Sequence conflict | 501 | 1 | S → T in BAE20439. Ref.2 | ||||||
| Sequence conflict | 520 | 1 | D → H in BAE20439. Ref.2 | ||||||
| Sequence conflict | 768 | 1 | K → R in BAC33100. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "RasGRP, a Ras activator: mouse and human cDNA sequences and chromosomal positions." Bottorff D.A., Ebinu J.O., Stone J.C. Mamm. Genome 10:358-361(1999) [PubMed: 10087292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: C57BL/6 X C3H. Tissue: Brain. |
| [2] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6J. Tissue: Brain, Corpus striatum and Hippocampus. |
| [3] | "Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. Ponting C.P.PLoS Biol. 7:E1000112-E1000112(2009) [PubMed: 19468303] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6. Tissue: Fetal brain. |
| [5] | "Regulation of RasGRP via a phorbol ester-responsive C1 domain." Tognon C.E., Kirk H.E., Passmore L.A., Whitehead I.P., Der C.J., Kay R.J. Mol. Cell. Biol. 18:6995-7008(1998) [PubMed: 9819387] [Abstract] Cited for: FUNCTION, MUTAGENESIS OF ARG-271, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. |
| [6] | "RasGRP is essential for mouse thymocyte differentiation and TCR signaling." Dower N.A., Stang S.L., Bottorff D.A., Ebinu J.O., Dickie P., Ostergaard H.L., Stone J.C. Nat. Immunol. 1:317-321(2000) [PubMed: 11017103] [Abstract] Cited for: DISRUPTION PHENOTYPE, FUNCTION IN T-CELL ACTIVATION, TISSUE SPECIFICITY. |
| [7] | "RasGRP1 transduces low-grade TCR signals which are critical for T cell development, homeostasis, and differentiation." Priatel J.J., Teh S.-J., Dower N.A., Stone J.C., Teh H.-S. Immunity 17:617-627(2002) [PubMed: 12433368] [Abstract] Cited for: FUNCTION, TISSUE SPECIFICITY. |
| [8] | "Autoimmunity as the consequence of a spontaneous mutation in Rasgrp1." Layer K., Lin G., Nencioni A., Hu W., Schmucker A., Antov A.N., Li X., Takamatsu S., Chevassut T., Dower N.A., Stang S.L., Beier D., Buhlmann J., Bronson R.T., Elkon K.B., Stone J.C., Van Parijs L., Lim B. Immunity 19:243-255(2003) [PubMed: 12932358] [Abstract] Cited for: FUNCTION. |
| [9] | "RasGRP1 represents a novel non-protein kinase C phorbol ester signaling pathway in mouse epidermal keratinocytes." Rambaratsingh R.A., Stone J.C., Blumberg P.M., Lorenzo P.S. J. Biol. Chem. 278:52792-52801(2003) [PubMed: 14532295] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, TOPOLOGY, TISSUE SPECIFICITY, INDUCTION BY TPA. |
| [10] | "Transgenic expression of RasGRP1 induces the maturation of double-negative thymocytes and enhances the production of CD8 single-positive thymocytes." Norment A.M., Bogatzki L.Y., Klinger M.B., Ojala E.W., Bevan M.J., Kay R.J. J. Immunol. 170:1141-1149(2003) [PubMed: 12538669] [Abstract] Cited for: FUNCTION, INDUCTION. |
| [11] | "Phospholipase Cgamma activates Ras on the Golgi apparatus by means of RasGRP1." Bivona T.G., Perez De Castro I., Ahearn I.M., Grana T.M., Chiu V.K., Lockyer P.J., Cullen P.J., Pellicer A., Cox A.D., Philips M.R. Nature 424:694-698(2003) [PubMed: 12845332] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION. |
| [12] | "RasGRP1 sensitizes an immature B cell line to antigen receptor-induced apoptosis." Guilbault B., Kay R.J. J. Biol. Chem. 279:19523-19530(2004) [PubMed: 14970203] [Abstract] Cited for: FUNCTION IN B-CELLS, TISSUE SPECIFICITY, MUTAGENESIS OF ARG-271. |
| [13] | "RasGRP1 and RasGRP3 regulate B cell proliferation by facilitating B cell receptor-Ras signaling." Coughlin J.J., Stang S.L., Dower N.A., Stone J.C. J. Immunol. 175:7179-7184(2005) [PubMed: 16301621] [Abstract] Cited for: FUNCTION. |
| [14] | "Deregulated expression of RasGRP1 initiates thymic lymphomagenesis independently of T-cell receptors." Klinger M.B., Guilbault B., Goulding R.E., Kay R.J. Oncogene 24:2695-2704(2005) [PubMed: 15829980] [Abstract] Cited for: FUNCTION. |
| [15] | "RasGRP1 transmits prodifferentiation TCR signaling that is crucial for CD4 T cell development." Priatel J.J., Chen X., Dhanji S., Abraham N., Teh H.-S. J. Immunol. 177:1470-1480(2006) [PubMed: 16849453] [Abstract] Cited for: DISRUPTION PHENOTYPE, FUNCTION. |
| [16] | "Differential membrane binding and diacylglycerol recognition by C1 domains of RasGRPs." Johnson J.E., Goulding R.E., Ding Z., Partovi A., Anthony K.V., Beaulieu N., Tazmini G., Cornell R.B., Kay R.J. Biochem. J. 406:223-236(2007) [PubMed: 17523924] [Abstract] Cited for: DIACYLGLYCEROL-BINDING, SUBCELLULAR LOCATION. |
| [17] | "Transgenic overexpression of RasGRP1 in mouse epidermis results in spontaneous tumors of the skin." Oki-Idouchi C.E., Lorenzo P.S. Cancer Res. 67:276-280(2007) [PubMed: 17210708] [Abstract] Cited for: FUNCTION. |
| [18] | "An essential role for RasGRP1 in mast cell function and IgE-mediated allergic response." Liu Y., Zhu M., Nishida K., Hirano T., Zhang W. J. Exp. Med. 204:93-103(2007) [PubMed: 17190838] [Abstract] Cited for: FUNCTION IN MAST CELLS ACTIVATION, TISSUE SPECIFICITY. |
| [19] | "Chronic immunodeficiency in mice lacking RasGRP1 results in CD4 T cell immune activation and exhaustion." Priatel J.J., Chen X., Zenewicz L.A., Shen H., Harder K.W., Horwitz M.S., Teh H.-S. J. Immunol. 179:2143-2152(2007) [PubMed: 17675473] [Abstract] Cited for: DISRUPTION PHENOTYPE. |
| [20] | "Regulation of RasGRP1 by B cell antigen receptor requires cooperativity between three domains controlling translocation to the plasma membrane." Beaulieu N., Zahedi B., Goulding R.E., Tazmini G., Anthony K.V., Omeis S.L., de Jong D.R., Kay R.J. Mol. Biol. Cell 18:3156-3168(2007) [PubMed: 17567957] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF106070 mRNA. Translation: AAC97348.1. AK028308 mRNA. Translation: BAE20439.1. AK047613 mRNA. Translation: BAC33100.1. AK141524 mRNA. Translation: BAE24718.1. AL844579, AL928959 Genomic DNA. Translation: CAM17832.1. AL928959, AL844579 Genomic DNA. Translation: CAM26780.1. BC057120 mRNA. Translation: AAH57120.1. BC057341 mRNA. Translation: AAH57341.1. |
| IPI | IPI00130414. |
| RefSeq | NP_035376.1. |
| UniGene | Mm.42150 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1PTQ based on UniProtKB P28867. |
| SMR | Q9Z1S3. Positions 205-436, 359-526, 460-594. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9Z1S3. |
PTM databases | |
| PhosphoSite | Q9Z1S3. |
Proteomic databases | |
| PRIDE | Q9Z1S3. |
Genome annotation databases | |
| Ensembl | ENSMUST00000028823; ENSMUSP00000028823; ENSMUSG00000027347; Mus musculus. [Genome view] ENSMUST00000102534; ENSMUSP00000099593; ENSMUSG00000027347; Mus musculus. [Genome view] |
| GeneID | 19419. |
| KEGG | mmu:19419. |
| UCSC | uc008lrl.1. mouse. |
Organism-specific databases | |
| CTD | 19419. |
| MGI | MGI:1314635. Rasgrp1. |
Phylogenomic databases | |
| eggNOG | roNOG05075. |
| HOGENOM | HBG403023. |
| HOVERGEN | Q9Z1S3. |
| InParanoid | Q9Z1S3. |
| OMA | AQITQFR. |
| OrthoDB | EOG9Z91FN. |
Gene expression databases | |
| ArrayExpress | Q9Z1S3. |
| Bgee | Q9Z1S3. |
| CleanEx | MM_RASGRP1. |
| Genevestigator | Q9Z1S3. |
Family and domain databases | |
| InterPro | IPR020454. DAG/PE_bd. IPR011992. EF-hand-like_dom. IPR018247. EF_Hand_1_Ca_BS. IPR018249. EF_HAND_2. IPR002219. Prot_Kinase_C-like_PE/DAG_bd. IPR000651. Ras-like_Gua-exchang_fac_N. IPR008937. Ras_GEF. IPR001895. RasGRF_CDC25. [Graphical view] |
| Gene3D | G3DSA:1.10.238.10. EF-Hand_type. 1 hit. G3DSA:1.10.840.10. RasGRF_CDC25. 1 hit. |
| PANTHER | PTHR23113. Ras_GEF. 1 hit. |
| Pfam | PF00130. C1_1. 1 hit. PF00617. RasGEF. 1 hit. [Graphical view] |
| PRINTS | PR00008. DAGPEDOMAIN. |
| SMART | SM00109. C1. 1 hit. SM00147. RasGEF. 1 hit. SM00229. RasGEFN. 1 hit. [Graphical view] |
| PROSITE | PS00018. EF_HAND_1. 2 hits. PS50222. EF_HAND_2. 3 hits. PS00720. RASGEF. False negative. PS50009. RASGEF_CAT. 1 hit. PS50212. RASGEF_NTER. 1 hit. PS00479. ZF_DAG_PE_1. 1 hit. PS50081. ZF_DAG_PE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 296563. |
| SOURCE | Search... |
Entry information
| Entry name | GRP1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q9Z1S3 Secondary accession number(s): Q3URH0, Q3V401, Q8BQP6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


