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Protein
Submitted name:

Testicular cell adhesion molecule 1

Gene

Tcam1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Testicular cell adhesion molecule 1Imported
Submitted name:
Testicular cell adhesion molecule 1 (TCAM1)Imported
Gene namesi
Name:Tcam1Imported
Synonyms:TCAM1Imported, Tcam1pImported
ORF Names:rCG_33774Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi69435. Tcam1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei489 – 510HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501084850422 – 548Sequence analysisAdd BLAST527

Expressioni

Gene expression databases

BgeeiENSRNOG00000010929.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014867.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini400 – 474Ig-likeInterPro annotationAdd BLAST75

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IPHM. Eukaryota.
ENOG410YQ1Q. LUCA.
GeneTreeiENSGT00530000063246.
HOGENOMiHOG000059554.
HOVERGENiHBG101044.
OMAiRNFSCEA.
OrthoDBiEOG091G022Y.
TreeFamiTF333745.

Family and domain databases

Gene3Di2.60.40.10. 5 hits.
InterProiView protein in InterPro
IPR013768. ICAM_N.
IPR003987. ICAM_VCAM_N.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
PfamiView protein in Pfam
PF03921. ICAM_N. 1 hit.
PRINTSiPR01472. ICAMVCAM1.
SMARTiView protein in SMART
SM00409. IG. 4 hits.
SUPFAMiSSF48726. SSF48726. 5 hits.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9Z133-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMLLLGIWT LLALIPCPGT TEVLFQVSVH PNQALVEFGH SLTINCSTTC
60 70 80 90 100
PDPGPSGIET FLKKTQLSKG SQWKEFLLEG ITENSVLQCF FSCAGVQKDT
110 120 130 140 150
ALDITMYQPP EQVILDLQPE WVAIDEAFTV KCHVPSVAPL QSLTLTLLQG
160 170 180 190 200
DQELHRKDFL SLSLVSQRAE VTVNVRAQRE NDRHNFSCRA ELDLSPHGGG
210 220 230 240 250
LFHGSSATKQ LRIFEFSQNP QILVPSLLEV GMAETMSCEV VRVFPAQEAV
260 270 280 290 300
FRMFLEDQEL SPFSSWKGDA AWASATIQAM ETGDQELTCL VSVGPVEQKA
310 320 330 340 350
RKPVHVYSFP PPVLEIEDAY PQAGTDVNVT CSGHVLTSPS PTLRLQGSLN
360 370 380 390 400
LSAPGEPAWL RFTAREEDDG RTLSCEASLV VQGQRLVKTT KIQLHVLYKP
410 420 430 440 450
RFQESDCPGN QIWVEGMDQM LACIPEGNPI PALVCIWNGM TFDLEVPQKA
460 470 480 490 500
TQNHTGTYSC TATNSLGSVS KDIAVLVQGL HEGISSSTIF IIIIFTLGMA
510 520 530 540
VITIALYLNY QPCKRNGRKR THRQKEQNKG GERQFSDIQA EECHAHLC
Length:548
Mass (Da):60,480
Last modified:May 1, 1999 - v1
Checksum:i901607DF9C1F686B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133055 Genomic DNA. No translation available.
AB015749 Genomic DNA. Translation: BAA75217.1.
CH473948 Genomic DNA. Translation: EDM06380.1.
RefSeqiNP_067705.1. NM_021673.1.
XP_006247704.1. XM_006247642.3.
UniGeneiRn.125075.

Genome annotation databases

EnsembliENSRNOT00000014867; ENSRNOP00000014867; ENSRNOG00000010929.
GeneIDi59305.
KEGGirno:59305.
UCSCiRGD:69435. rat.

Similar proteinsi

Entry informationi

Entry nameiQ9Z133_RAT
AccessioniPrimary (citable) accession number: Q9Z133
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: September 27, 2017
This is version 129 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported