Q9Z0R4 (ITSN1_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 131.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Intersectin-1 Alternative name(s): EH and SH3 domains protein 1 | ||||
| Gene names |
| ||||
| Organism | Mus musculus (Mouse) [Reference proteome] | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 1714 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles. Involved in endocytosis of integrin beta-1 (ITGB1) and transferrin receptor (TFR); internalization of ITGB1 as DAB2-dependent cargo but not TFR may involve association with DAB2. Inhibits ARHGAP31 activity toward RAC1. |
| Subunit structure | Interacts with dynamin, CDC42, SNAP25 and SNAP23. Clusters several dynamin in a manner that is regulated by alternative splicing. Interacts with clathrin-associated proteins and other components of the endocytic machinery, such as SPIN90, EPS15, EPN1, EPN2, STON2, FCHO1, FCHO2 and DAB2. Interacts (via SH3 domains) with REPS1 and SGIP1. Interacts with ARHGAP31. Interacts with ADAM15. Ref.4 Ref.11 |
| Subcellular location | Endomembrane system By similarity. Cell junction › synapse › synaptosome By similarity. Cell projection › lamellipodium By similarity. Membrane › clathrin-coated pit By similarity. Note: Colocalizes with SGIP1 at the plasma membrane in structures corresponding most problably to clathrin-coated pits By similarity. |
| Tissue specificity | Widely expressed. Expressed at high levels in brain, heart and skeletal muscle. |
| Domain | SH3-3, SH3-4 and SH3-5, but not SH3-1 and SH3-2 domains, bind to dynamin By similarity. SH3-1 and SH3-4 bind to ARHGAP31. The KLERQ domain binds to SNAP-25 and SNAP-23 By similarity. |
| Miscellaneous | Overexpression results in the inhibition of the transferrin uptake and the blockage of the clathrin-mediated endocytosis. |
| Sequence similarities | Contains 1 C2 domain. Contains 1 DH (DBL-homology) domain. Contains 2 EF-hand domains. Contains 2 EH domains. Contains 1 PH domain. Contains 5 SH3 domains. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| Arhgap31 | A6X8Z5 | 3 | EBI-645386,EBI-4325995 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] Note: Additional isoforms seem to exist. | ||||||
| Isoform 1 (identifier: Q9Z0R4-1) Also known as: Ese1L; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9Z0R4-2) The sequence of this isoform differs from the canonical sequence as follows: 1214-1714: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1714 | 1714 | Intersectin-1 | PRO_0000080958 | |||||||||||||||||||||||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||||||||||||||||||||||
| Domain | 21 – 109 | 89 | EH 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 53 – 88 | 36 | EF-hand 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 221 – 310 | 90 | EH 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 254 – 289 | 36 | EF-hand 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 738 – 799 | 62 | SH3 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 906 – 964 | 59 | SH3 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 995 – 1053 | 59 | SH3 3 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 1067 – 1131 | 65 | SH3 4 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 1148 – 1207 | 60 | SH3 5 | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 1230 – 1416 | 187 | DH | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 1455 – 1564 | 110 | PH | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 1576 – 1672 | 97 | C2 | ||||||||||||||||||||||||||||||||||||||||||||
| Calcium binding | 66 – 78 | 13 | 1 Potential | ||||||||||||||||||||||||||||||||||||||||||||
| Calcium binding | 267 – 279 | 13 | 2 Potential | ||||||||||||||||||||||||||||||||||||||||||||
| Region | 326 – 702 | 377 | KLERQ | ||||||||||||||||||||||||||||||||||||||||||||
| Coiled coil | 352 – 662 | 311 | Potential | ||||||||||||||||||||||||||||||||||||||||||||
| Compositional bias | 321 – 324 | 4 | Poly-Ser | ||||||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 313 | 1 | Phosphoserine Ref.9 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 315 | 1 | Phosphoserine Ref.5 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 318 | 1 | Phosphoserine Ref.9 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 334 | 1 | Phosphoserine Ref.9 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 335 | 1 | Phosphoserine Ref.5 Ref.7 Ref.9 Ref.10 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 895 | 1 | Phosphoserine Ref.5 Ref.9 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 897 | 1 | Phosphoserine Ref.9 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 970 | 1 | Phosphothreonine Ref.8 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 977 | 1 | Phosphothreonine Ref.9 | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 1130 | 1 | Phosphoserine Ref.6 | ||||||||||||||||||||||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1214 – 1714 | 501 | Missing in isoform 2. | VSP_004296 | |||||||||||||||||||||||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 179 | 1 | L → W in AAD19749. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 179 | 1 | L → W in AAD19746. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 402 | 1 | R → A in AAD19749. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 402 | 1 | R → A in AAD19746. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 1151 – 1157 | 7 | |||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 1174 – 1179 | 6 | |||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 1185 – 1190 | 6 | |||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 1193 – 1198 | 6 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1199 – 1201 | 3 | |||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 1202 – 1204 | 3 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1205 – 1207 | 3 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1210 – 1214 | 5 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1221 – 1223 | 3 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1226 – 1255 | 30 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1258 – 1261 | 4 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1268 – 1275 | 8 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1278 – 1299 | 22 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1309 – 1315 | 7 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1316 – 1320 | 5 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1321 – 1342 | 22 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1344 – 1353 | 10 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1357 – 1359 | 3 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1364 – 1367 | 4 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1370 – 1386 | 17 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1396 – 1422 | 27 | |||||||||||||||||||||||||||||||||||||||||||||
| Helix | 1423 – 1425 | 3 | |||||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The EH and SH3 domain Ese proteins regulate endocytosis by linking to dynamin and Eps15." Sengar A.S., Wang W., Bishay J., Cohen S., Egan S.E. EMBO J. 18:1159-1171(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [2] | "Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. Ponting C.P.PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J. |
| [3] | "Mouse homologues of human chromosome 21 genes." Skripkina I.Y., Tsyba L.O., Anoprienko O.V., Slavov D., Tassone F., Rynditch A.V., Gardiner K. Submitted (MAR-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 966-1714, NUCLEOTIDE SEQUENCE [MRNA] OF 545-599 (ISOFORMS 1 AND 2). Strain: 129/Ola. Tissue: Spleen. |
| [4] | "The activity of the GTPase-activating protein CdGAP is regulated by the endocytic protein intersectin." Jenna S., Hussain N.K., Danek E.I., Triki I., Wasiak S., McPherson P.S., Lamarche-Vane N. J. Biol. Chem. 277:6366-6373(2002) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH ARHGAP31. |
| [5] | "Phosphoproteomic analysis of the developing mouse brain." Ballif B.A., Villen J., Beausoleil S.A., Schwartz D., Gygi S.P. Mol. Cell. Proteomics 3:1093-1101(2004) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-315; SER-335 AND SER-895, MASS SPECTROMETRY. Tissue: Embryonic brain. |
| [6] | "Comprehensive identification of phosphorylation sites in postsynaptic density preparations." Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R., Burlingame A.L. Mol. Cell. Proteomics 5:914-922(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1130, MASS SPECTROMETRY. Tissue: Brain. |
| [7] | "Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry." Dai J., Jin W.-H., Sheng Q.-H., Shieh C.-H., Wu J.-R., Zeng R. J. Proteome Res. 6:250-262(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-335, MASS SPECTROMETRY. Tissue: Liver. |
| [8] | "Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations." Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M. Mol. Cell. Proteomics 6:283-293(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-970, MASS SPECTROMETRY. Tissue: Brain cortex. |
| [9] | "Large-scale phosphorylation analysis of mouse liver." Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-313; SER-318; SER-334; SER-335; SER-895; SER-897 AND THR-977, MASS SPECTROMETRY. Tissue: Liver. |
| [10] | "Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis." Zhou H., Ye M., Dong J., Han G., Jiang X., Wu R., Zou H. J. Proteome Res. 7:3957-3967(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-335, MASS SPECTROMETRY. Tissue: Liver. |
| [11] | "FCHo proteins are nucleators of clathrin-mediated endocytosis." Henne W.M., Boucrot E., Meinecke M., Evergren E., Vallis Y., Mittal R., McMahon H.T. Science 328:1281-1284(2010) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH FCHO2. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF132481 mRNA. Translation: AAD19749.1. AF132478 mRNA. Translation: AAD19746.1. AC126053 Genomic DNA. No translation available. AC131691 Genomic DNA. No translation available. AC134837 Genomic DNA. No translation available. AF169621 mRNA. Translation: AAD48848.1. AF356517 Genomic DNA. Translation: AAK40228.1. | ||||||||||||||||||
| IPI | IPI00129356. IPI00222409. | ||||||||||||||||||
| RefSeq | NP_001103745.1. NM_001110275.1. NP_034717.2. NM_010587.2. | ||||||||||||||||||
| UniGene | Mm.40546. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||
| ProteinModelPortal | Q9Z0R4. | ||||||||||||||||||
| SMR | Q9Z0R4. Positions 1-111, 210-312, 906-964, 998-1053, 1063-1574, 1588-1711. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | Q9Z0R4. 6 interactions. | ||||||||||||||||||
| MINT | MINT-86500. | ||||||||||||||||||
| STRING | 10090.ENSMUSP00000066361. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q9Z0R4. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | Q9Z0R4. | ||||||||||||||||||
| PRIDE | Q9Z0R4. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENSMUST00000056482; ENSMUSP00000056011; ENSMUSG00000022957. ENSMUST00000114002; ENSMUSP00000109635; ENSMUSG00000022957. | ||||||||||||||||||
| GeneID | 16443. | ||||||||||||||||||
| KEGG | mmu:16443. | ||||||||||||||||||
| UCSC | uc007zyj.1. mouse. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 6453. | ||||||||||||||||||
| MGI | MGI:1338069. Itsn1. | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | COG5422. | ||||||||||||||||||
| GeneTree | ENSGT00700000104202. | ||||||||||||||||||
| HOGENOM | HOG000010175. | ||||||||||||||||||
| HOVERGEN | HBG052159. | ||||||||||||||||||
| OrthoDB | EOG46Q6RS. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| CleanEx | MM_ITSN1. | ||||||||||||||||||
| Genevestigator | Q9Z0R4. | ||||||||||||||||||
| GermOnline | ENSMUSG00000022957. Mus musculus. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 1.10.238.10. 2 hits. 1.20.900.10. 1 hit. 2.30.29.30. 1 hit. | ||||||||||||||||||
| InterPro | IPR000008. C2_Ca-dep. IPR008973. C2_Ca/lipid-bd_dom_CaLB. IPR018029. C2_membr_targeting. IPR000219. DH-domain. IPR011992. EF-hand-like_dom. IPR018247. EF_Hand_1_Ca_BS. IPR002048. EF_hand_dom. IPR000261. EPS15_homology. IPR001331. GDS_CDC24_CS. IPR026813. ITSN1. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. IPR011511. SH3_2. IPR001452. SH3_domain. [Graphical view] | ||||||||||||||||||
| PANTHER | PTHR11216:SF28. PTHR11216:SF28. 1 hit. | ||||||||||||||||||
| Pfam | PF00168. C2. 1 hit. PF00169. PH. 1 hit. PF00621. RhoGEF. 1 hit. PF00018. SH3_1. 4 hits. PF07653. SH3_2. 1 hit. [Graphical view] | ||||||||||||||||||
| PRINTS | PR00452. SH3DOMAIN. | ||||||||||||||||||
| SMART | SM00239. C2. 1 hit. SM00054. EFh. 2 hits. SM00027. EH. 2 hits. SM00233. PH. 1 hit. SM00325. RhoGEF. 1 hit. SM00326. SH3. 5 hits. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF49562. C2_CaLB. 1 hit. SSF48065. DH-domain. 1 hit. SSF50044. SH3. 5 hits. | ||||||||||||||||||
| PROSITE | PS50004. C2. 1 hit. PS00741. DH_1. 1 hit. PS50010. DH_2. 1 hit. PS00018. EF_HAND_1. 2 hits. PS50222. EF_HAND_2. 2 hits. PS50031. EH. 2 hits. PS50003. PH_DOMAIN. 1 hit. PS50002. SH3. 5 hits. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| ChiTaRS | ITSN1. mouse. | ||||||||||||||||||
| EvolutionaryTrace | Q9Z0R4. | ||||||||||||||||||
| NextBio | 289695. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | ITSN1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q9Z0R4 Secondary accession number(s): F8VQE5, Q9R143 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
