Q9YPD4 (CAPSD_MBVLF) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Capsid protein
Short name=CP

Alternative name(s):
Coat protein

Gene names

ORF Names:

ORF4

Organism

Mushroom bacilliform virus (isolate Australia/AUS LF-1) (MBV) [Reference proteome]

Taxonomic identifier

650482 [NCBI]

Taxonomic lineage

Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Barnaviridae › Barnavirus › Mushroom bacilliform virus

Virus host

Agaricus bisporus (White button mushroom) [TaxID: 5341]

Protein attributes

Sequence length	198 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Function	Capsid protein self-assembles to form a bacilliform icosahedral capsid with a T=1 symmetry, about 50 nm length and 20 nm large Potential.
Subcellular location	Virion Potential.

Ontologies

Keywords
Cellular component	Virion
Molecular function	Capsid protein T=1 icosahedral capsid protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	T=1 icosahedral viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 198	198	Capsid protein		PRO_0000402446

Sequences

	Sequence		Length	Mass (Da)
	Q9YPD4 [UniParc]. Last modified May 1, 1999. Version 1. Checksum: 0E9381BD6171ABB3	FASTA	198	21,853
	10 20 30 40 50 60 MANRRQSRRR GNKNRNSATV RRAPPNRATQ SSSGKVKFVK WIAASPTKLI PHIGENETSY 70 80 90 100 110 120 GVLFDITGTT FPELSSLMSR HSRYRVLSLG ARIVPYDPNC LGAHSVKVFA ESVYDSSATP 130 140 150 160 170 180 TVPSVHYLQS NGCRVVPANK QLSSPPSSDV NKYYEICSDD AVIGRIMYAW NGPGLSTARV 190 GFCSFEVYAD LEFDGIRE

References

[1]	"The nucleotide sequence and genome organization of mushroom bacilliform virus: a single-stranded RNA virus of Agaricus bisporus (Lange) Imbach." Revill P.A., Davidson A.D., Wright P.J. Virology 202:904-911(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	U07551 Genomic RNA. Translation: AAA53091.1.
RefSeq	NP_042511.1. NC_001633.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1497106.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

CAPSD_MBVLF

Accession

Primary (citable) accession number: Q9YPD4

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 30, 2010
Last sequence update:	May 1, 1999
Last modified:	April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program