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Q9YKL8

- NSP1_ROTD9

UniProt

Q9YKL8 - NSP1_ROTD9

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Protein
Non-structural protein 1
Gene
N/A
Organism
Rotavirus A (isolate Dog/United States/K9/1981 G3-P5A[3]-I3-R3-C2-M3-A9-N2-T3-E3-H6) (RV-A)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Seems to induce the proteasome-dependent degradation of IRF3, IRF5 and IRF7, thereby antagonizing the cellular interferon response and establishment of the antiviral state. Binds and targets IRF3 early post-infection and suppresses IRF3 nuclear translocation By similarity.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri42 – 7938 Reviewed prediction
Add
BLAST

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

  1. suppression by virus of host IRF3 activity Source: UniProtKB-KW
  2. suppression by virus of host IRF7 activity Source: UniProtKB-KW
  3. suppression by virus of host NF-kappaB transcription factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Host-virus interaction, Inhibition of host innate immune response by virus, Inhibition of host IRF3 by virus, Inhibition of host IRF7 by virus, Inhibition of host NF-kappa-B by virus, Inhibition of host RLR pathway by virus, Interferon antiviral system evasion, Viral immunoevasion

Keywords - Ligandi

Metal-binding, RNA-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 1
Short name:
NSP1
Alternative name(s):
NCVP2
Non-structural RNA-binding protein 53
Short name:
NS53
OrganismiRotavirus A (isolate Dog/United States/K9/1981 G3-P5A[3]-I3-R3-C2-M3-A9-N2-T3-E3-H6) (RV-A)
Taxonomic identifieri557232 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
Virus hostiCanis familiaris (Dog) (Canis lupus familiaris) [TaxID: 9615]

Subcellular locationi

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-KW
  2. host cytoskeleton Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Host cytoskeleton

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 493493Non-structural protein 1
PRO_0000369070Add
BLAST

Interactioni

Subunit structurei

Interacts (via C-terminus) with host IRF3; this interaction leads to IRF3 degradation. Interacts with host IRF7; this interaction leads to IRF7 degradation By similarity.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni1 – 8181RNA-binding By similarity
Add
BLAST
Regioni82 – 17695Important for cytoskeleton localization By similarity
Add
BLAST
Regioni314 – 493180Interaction with IRF3 By similarity
Add
BLAST

Domaini

The zinc-finger domain is important, but not sufficient for binding and degrading IRF3. It is sometimes described as a RING zinc-finger, but it is atypical and it is unclear whether it is related with ubiquitin ligase activity By similarity.

Sequence similaritiesi

Belongs to the rotavirus A NSP1 family.

Keywords - Domaini

Zinc-finger

Family and domain databases

InterProiIPR002148. Rotavirus_NSP1.
[Graphical view]
PfamiPF00981. Rota_NS53. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9YKL8-1 [UniParc]FASTAAdd to Basket

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MATFKDACFH YRKITKLNRE LLRIGANSVW IPVSSNKIKG WCIECCQLTE    50
LTFCHGCSLA HVCQWCIQNK RCFLDNEPHL LKLRTFESPI TKEKLQCIID 100
LYNLLFPINP GIINRFKKIV NQRKCRNEFE QSWYNQLLFP ITLNAAVFKF 150
HSREVYVFGL YEGSSSCINL PYRIVNCIDL YDRLLLDQIN FERMSSLPAS 200
LQSVYANKYF KLSRLPSMKL KQIYYSDFSK QNLINKCKIK SRIVLRNLTE 250
FTWDSQISLH YDVINNREKI LTALSTSSLK RFETHDLNLG RIKADIFELG 300
HHCKPNFISS NHWQPASNVS QCRWCNVKYV FRNMDWKMES MYNELLSFIQ 350
ACYKSNVNVG NCSSIENAYP LVKDMIWHSI TKYIDQTIEK LFNVMNPVEV 400
DGQQVISFHW QIDVALYIHI KMILKTETLP FALTLYQFGS IIKGIVNQWY 450
DVTELDYLPL CTEQTDKLVK LEEEGKISEE YELLISDSED DDQ 493
Length:493
Mass (Da):57,940
Last modified:May 1, 1999 - v1
Checksum:i9CAF6149EAFF8AA3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF111946 Genomic RNA. Translation: AAD20225.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF111946 Genomic RNA. Translation: AAD20225.1 .

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR002148. Rotavirus_NSP1.
[Graphical view ]
Pfami PF00981. Rota_NS53. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Functional analysis of the heterologous NSP1 genes in the genetic background of simian rotavirus SA11."
    Okada J., Kobayashi N., Taniguchi K., Shiomi H.
    Arch. Virol. 144:1439-1449(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP1_ROTD9
AccessioniPrimary (citable) accession number: Q9YKL8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 1, 1999
Last modified: February 19, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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