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Q9YI58 (Q9YI58_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length590 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q9YI58 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 9DE9A26C834A5474

FASTA59066,711
        10         20         30         40         50         60 
MASSAPSSSN DAPDPAPTNL RPTTYDSWCG VAHGCTRKIG LKICGFLQRT NSLEDKGRIV 

        70         80         90        100        110        120 
GSLKERQSSK NLLACENSER EARFRRTETD FSNLYARDLL PAKNGEEQTM QFLLEVVDIL 

       130        140        150        160        170        180 
LNYVRKTFDR STKVLDFHHP HQLLEGMEGF NLELSDNPES LEQILVDCRD TLKYGVRTGH 

       190        200        210        220        230        240 
PRFFNQLSTG LDMIGLAGEW LTSTANTNMF TYEIAPVFVL MEQITLRKMR EIIGWSNKDG 

       250        260        270        280        290        300 
DGIFSPGGAI SNMYSIMAAR YKYFPEVKTK GMAAVPKLVL FTSEHSHYSI KKAGAALGFG 

       310        320        330        340        350        360 
TDNVILIKCN ERGKIIPADL EAKILEAKQK GYVPLFVNAT AGTTVYGAFD PIQEIADICE 

       370        380        390        400        410        420 
KYNLWLHVDA AWGGGLLMSR KHRHKLNGIE RANSVTWNPH KMMGVLLQCS AILVREKGIL 

       430        440        450        460        470        480 
QGCNQMCAGY LFQQDKQYDV SYDTGDKAIQ CGRHVDIFKF WLMWKAKGTV GFENQINKCL 

       490        500        510        520        530        540 
ELAEYLYTKI KNREEFEMVF EGEPEHTNVC FWYIPPSLRG MPDCDERREK LHRVAPKIKA 

       550        560        570        580        590 
LMMESGTTMV GYQPQGDKVN FFRMVISNPA ATKSDIDFLI EEIERLGQEL 

« Hide

References

« Hide 'large scale' references
[1]"Characterization of glutamate decarboxylase in chicken."
Wagberg F.
Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: White leghorn EMBL AAD01902.1.
[2]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000040750 Ensembl ENSGALP00000015612.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000015612.
[4]Ensembl
Submitted (MAY-2013) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000040750.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN03005349 Genomic DNA. No translation available.
AF030355 mRNA. Translation: AAD01902.1.
RefSeqNP_990244.1. NM_204913.1.
UniGeneGga.441.

3D structure databases

ProteinModelPortalQ9YI58.
SMRQ9YI58. Positions 89-589.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9031.ENSGALP00000015612.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000015628; ENSGALP00000015612; ENSGALG00000009589.
ENSGALT00000043162; ENSGALP00000040750; ENSGALG00000009589.
GeneID395743.
KEGGgga:395743.

Organism-specific databases

CTD2571.

Phylogenomic databases

eggNOGCOG0076.
GeneTreeENSGT00730000110441.
HOGENOMHOG000005382.
HOVERGENHBG004980.
InParanoidQ9YI58.
KOK01580.
OMAEYLYTKI.
OrthoDBEOG7H1JM3.
PhylomeDBQ9YI58.
TreeFamTF314688.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20815811.
PROQ9YI58.

Entry information

Entry nameQ9YI58_CHICK
AccessionPrimary (citable) accession number: Q9YI58
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: July 9, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)