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Q9YHU5

- Q9YHU5_TAKRU

UniProt

Q9YHU5 - Q9YHU5_TAKRU

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Protein
Submitted name:

Transcription factor E4TF1

Gene
N/A
Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor E4TF1Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi31033.ENSTRUP00000027075.

Structurei

3D structure databases

ProteinModelPortaliQ9YHU5.
SMRiQ9YHU5. Positions 35-120, 161-247, 308-417.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ETS family.UniRule annotation
Contains 1 ETS DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiNOG252121.
HOGENOMiHOG000285952.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.150.50. 1 hit.
InterProiIPR000418. Ets_dom.
IPR024668. GABP_asu_N.
IPR003118. Pointed_dom.
IPR013761. SAM/pointed.
IPR016312. TF_GA-bd_asu.
IPR029071. Ubiquitin-rel_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00178. Ets. 1 hit.
PF11620. GABP-alpha. 1 hit.
PF02198. SAM_PNT. 1 hit.
[Graphical view]
PIRSFiPIRSF001703. GABP_alpha. 1 hit.
PRINTSiPR00454. ETSDOMAIN.
SMARTiSM00413. ETS. 1 hit.
SM00251. SAM_PNT. 1 hit.
[Graphical view]
SUPFAMiSSF47769. SSF47769. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEiPS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.
PS51433. PNT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9YHU5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKTDTEEMI EIEIDEREKQ ACLEEGVEEQ NITASDLIQQ DIDINEPVGN
60 70 80 90 100
LKKLLEPRIQ IALDAYDICL QDIQIHPDHS LFDQGVKTDG TVQLSLQIIT
110 120 130 140 150
KPGEEKLNIL EIVKPVETVE VVIDPDAAGE EGALVEDGQL IAVERSGLSD
160 170 180 190 200
EASEQVTRWA AALEGYRKEQ VRLGIPYDPV LWSADQVIHW AVWVMKEFNI
210 220 230 240 250
DEMEIGSIHI PGRDLCSFSQ EEFLQKVPNG EILWSHLELL RKYVLASQDQ
260 270 280 290 300
SGGDATVTID QPVQIIPTQV NTPTAIKVLK QSRGPRAPRI SGEERSSPGN
310 320 330 340 350
RTGNNGQIQM WQFLLELLTD KDARDCIYRV GEEGEFKLNQ PELVAQKWGQ
360 370 380 390 400
RKNKPTMNYE KLSRALRYYY DGDMISKVQG KRFVNKFVCD LRTLIGYSAA
410 420 430 440
EFNALVSECE QKKVTRMQIH GMGQPITTVT LATTTLDKDS
Length:440
Mass (Da):49,595
Last modified:May 1, 1999 - v1
Checksum:iC25C0A21F78B0BCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF090120 Genomic DNA. Translation: AAD13395.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF090120 Genomic DNA. Translation: AAD13395.1 .

3D structure databases

ProteinModelPortali Q9YHU5.
SMRi Q9YHU5. Positions 35-120, 161-247, 308-417.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 31033.ENSTRUP00000027075.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

eggNOGi NOG252121.
HOGENOMi HOG000285952.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.10.150.50. 1 hit.
InterProi IPR000418. Ets_dom.
IPR024668. GABP_asu_N.
IPR003118. Pointed_dom.
IPR013761. SAM/pointed.
IPR016312. TF_GA-bd_asu.
IPR029071. Ubiquitin-rel_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00178. Ets. 1 hit.
PF11620. GABP-alpha. 1 hit.
PF02198. SAM_PNT. 1 hit.
[Graphical view ]
PIRSFi PIRSF001703. GABP_alpha. 1 hit.
PRINTSi PR00454. ETSDOMAIN.
SMARTi SM00413. ETS. 1 hit.
SM00251. SAM_PNT. 1 hit.
[Graphical view ]
SUPFAMi SSF47769. SSF47769. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEi PS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.
PS51433. PNT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Analysis of pufferfish homologues of the AT-rich human APP gene."
    Villard L., Tassone F., Crnogorac-Jurcevic T., Clancy K., Gardiner K.
    Gene 210:17-24(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Structures, sequence characteristics, and synteny relationships of the transcription factor E4TF1, the splicing factor U2AF35 and the cystathionine beta synthetase genes from Fugu rubripes."
    Tassone F., Villard L., Clancy K., Gardiner K.
    Gene 226:211-223(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9YHU5_TAKRU
AccessioniPrimary (citable) accession number: Q9YHU5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: October 29, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)