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Q9YHU5

- Q9YHU5_TAKRU

UniProt

Q9YHU5 - Q9YHU5_TAKRU

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Protein
Submitted name: Transcription factor E4TF1
Gene
N/A
Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor E4TF1Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataPercomorphariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi31033.ENSTRUP00000027075.

Structurei

3D structure databases

ProteinModelPortaliQ9YHU5.
SMRiQ9YHU5. Positions 35-120, 161-247, 308-417.

Family & Domainsi

Sequence similaritiesi

Belongs to the ETS family.UniRule annotation
Contains 1 ETS DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiNOG252121.
HOGENOMiHOG000285952.
InParanoidiQ9YHU5.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.150.50. 1 hit.
InterProiIPR000418. Ets_dom.
IPR024668. GABP_asu_N.
IPR003118. Pointed_dom.
IPR013761. SAM/pointed.
IPR016312. TF_GA-bd_asu.
IPR029071. Ubiquitin-rel_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00178. Ets. 1 hit.
PF11620. GABP-alpha. 1 hit.
PF02198. SAM_PNT. 1 hit.
[Graphical view]
PIRSFiPIRSF001703. GABP_alpha. 1 hit.
PRINTSiPR00454. ETSDOMAIN.
SMARTiSM00413. ETS. 1 hit.
SM00251. SAM_PNT. 1 hit.
[Graphical view]
SUPFAMiSSF47769. SSF47769. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEiPS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.
PS51433. PNT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9YHU5-1 [UniParc]FASTAAdd to Basket

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MSKTDTEEMI EIEIDEREKQ ACLEEGVEEQ NITASDLIQQ DIDINEPVGN    50
LKKLLEPRIQ IALDAYDICL QDIQIHPDHS LFDQGVKTDG TVQLSLQIIT 100
KPGEEKLNIL EIVKPVETVE VVIDPDAAGE EGALVEDGQL IAVERSGLSD 150
EASEQVTRWA AALEGYRKEQ VRLGIPYDPV LWSADQVIHW AVWVMKEFNI 200
DEMEIGSIHI PGRDLCSFSQ EEFLQKVPNG EILWSHLELL RKYVLASQDQ 250
SGGDATVTID QPVQIIPTQV NTPTAIKVLK QSRGPRAPRI SGEERSSPGN 300
RTGNNGQIQM WQFLLELLTD KDARDCIYRV GEEGEFKLNQ PELVAQKWGQ 350
RKNKPTMNYE KLSRALRYYY DGDMISKVQG KRFVNKFVCD LRTLIGYSAA 400
EFNALVSECE QKKVTRMQIH GMGQPITTVT LATTTLDKDS 440
Length:440
Mass (Da):49,595
Last modified:May 1, 1999 - v1
Checksum:iC25C0A21F78B0BCD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF090120 Genomic DNA. Translation: AAD13395.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF090120 Genomic DNA. Translation: AAD13395.1 .

3D structure databases

ProteinModelPortali Q9YHU5.
SMRi Q9YHU5. Positions 35-120, 161-247, 308-417.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 31033.ENSTRUP00000027075.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

eggNOGi NOG252121.
HOGENOMi HOG000285952.
InParanoidi Q9YHU5.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.10.150.50. 1 hit.
InterProi IPR000418. Ets_dom.
IPR024668. GABP_asu_N.
IPR003118. Pointed_dom.
IPR013761. SAM/pointed.
IPR016312. TF_GA-bd_asu.
IPR029071. Ubiquitin-rel_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00178. Ets. 1 hit.
PF11620. GABP-alpha. 1 hit.
PF02198. SAM_PNT. 1 hit.
[Graphical view ]
PIRSFi PIRSF001703. GABP_alpha. 1 hit.
PRINTSi PR00454. ETSDOMAIN.
SMARTi SM00413. ETS. 1 hit.
SM00251. SAM_PNT. 1 hit.
[Graphical view ]
SUPFAMi SSF47769. SSF47769. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEi PS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.
PS51433. PNT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Analysis of pufferfish homologues of the AT-rich human APP gene."
    Villard L., Tassone F., Crnogorac-Jurcevic T., Clancy K., Gardiner K.
    Gene 210:17-24(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Structures, sequence characteristics, and synteny relationships of the transcription factor E4TF1, the splicing factor U2AF35 and the cystathionine beta synthetase genes from Fugu rubripes."
    Tassone F., Villard L., Clancy K., Gardiner K.
    Gene 226:211-223(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9YHU5_TAKRU
AccessioniPrimary (citable) accession number: Q9YHU5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: June 11, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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