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Q9YHU5

- Q9YHU5_TAKRU

UniProt

Q9YHU5 - Q9YHU5_TAKRU

Protein
Submitted name:

Transcription factor E4TF1

Gene
N/A
Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 1 (01 May 1999)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: InterPro
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    Keywords - Ligandi

    DNA-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcription factor E4TF1Imported
    OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
    Taxonomic identifieri31033 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataPercomorphariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-KW

    Keywords - Cellular componenti

    NucleusUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi31033.ENSTRUP00000027075.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9YHU5.
    SMRiQ9YHU5. Positions 35-120, 161-247, 308-417.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ETS family.UniRule annotation
    Contains 1 ETS DNA-binding domain.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG252121.
    HOGENOMiHOG000285952.
    InParanoidiQ9YHU5.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    1.10.150.50. 1 hit.
    InterProiIPR000418. Ets_dom.
    IPR024668. GABP_asu_N.
    IPR003118. Pointed_dom.
    IPR013761. SAM/pointed.
    IPR016312. TF_GA-bd_asu.
    IPR029071. Ubiquitin-rel_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00178. Ets. 1 hit.
    PF11620. GABP-alpha. 1 hit.
    PF02198. SAM_PNT. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001703. GABP_alpha. 1 hit.
    PRINTSiPR00454. ETSDOMAIN.
    SMARTiSM00413. ETS. 1 hit.
    SM00251. SAM_PNT. 1 hit.
    [Graphical view]
    SUPFAMiSSF47769. SSF47769. 1 hit.
    SSF54236. SSF54236. 1 hit.
    PROSITEiPS00346. ETS_DOMAIN_2. 1 hit.
    PS50061. ETS_DOMAIN_3. 1 hit.
    PS51433. PNT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9YHU5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKTDTEEMI EIEIDEREKQ ACLEEGVEEQ NITASDLIQQ DIDINEPVGN    50
    LKKLLEPRIQ IALDAYDICL QDIQIHPDHS LFDQGVKTDG TVQLSLQIIT 100
    KPGEEKLNIL EIVKPVETVE VVIDPDAAGE EGALVEDGQL IAVERSGLSD 150
    EASEQVTRWA AALEGYRKEQ VRLGIPYDPV LWSADQVIHW AVWVMKEFNI 200
    DEMEIGSIHI PGRDLCSFSQ EEFLQKVPNG EILWSHLELL RKYVLASQDQ 250
    SGGDATVTID QPVQIIPTQV NTPTAIKVLK QSRGPRAPRI SGEERSSPGN 300
    RTGNNGQIQM WQFLLELLTD KDARDCIYRV GEEGEFKLNQ PELVAQKWGQ 350
    RKNKPTMNYE KLSRALRYYY DGDMISKVQG KRFVNKFVCD LRTLIGYSAA 400
    EFNALVSECE QKKVTRMQIH GMGQPITTVT LATTTLDKDS 440
    Length:440
    Mass (Da):49,595
    Last modified:May 1, 1999 - v1
    Checksum:iC25C0A21F78B0BCD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF090120 Genomic DNA. Translation: AAD13395.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF090120 Genomic DNA. Translation: AAD13395.1 .

    3D structure databases

    ProteinModelPortali Q9YHU5.
    SMRi Q9YHU5. Positions 35-120, 161-247, 308-417.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 31033.ENSTRUP00000027075.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    eggNOGi NOG252121.
    HOGENOMi HOG000285952.
    InParanoidi Q9YHU5.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    1.10.150.50. 1 hit.
    InterProi IPR000418. Ets_dom.
    IPR024668. GABP_asu_N.
    IPR003118. Pointed_dom.
    IPR013761. SAM/pointed.
    IPR016312. TF_GA-bd_asu.
    IPR029071. Ubiquitin-rel_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00178. Ets. 1 hit.
    PF11620. GABP-alpha. 1 hit.
    PF02198. SAM_PNT. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001703. GABP_alpha. 1 hit.
    PRINTSi PR00454. ETSDOMAIN.
    SMARTi SM00413. ETS. 1 hit.
    SM00251. SAM_PNT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47769. SSF47769. 1 hit.
    SSF54236. SSF54236. 1 hit.
    PROSITEi PS00346. ETS_DOMAIN_2. 1 hit.
    PS50061. ETS_DOMAIN_3. 1 hit.
    PS51433. PNT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of pufferfish homologues of the AT-rich human APP gene."
      Villard L., Tassone F., Crnogorac-Jurcevic T., Clancy K., Gardiner K.
      Gene 210:17-24(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Structures, sequence characteristics, and synteny relationships of the transcription factor E4TF1, the splicing factor U2AF35 and the cystathionine beta synthetase genes from Fugu rubripes."
      Tassone F., Villard L., Clancy K., Gardiner K.
      Gene 226:211-223(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiQ9YHU5_TAKRU
    AccessioniPrimary (citable) accession number: Q9YHU5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 1999
    Last sequence update: May 1, 1999
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)