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Q9YGX8 (Q9YGX8_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Potassium channel Shaker cKv1.4 EMBL AAD11454.1
Submitted name:
Uncharacterized protein Ensembl ENSGALP00000019808
Gene names
Name:KCNA4 Ensembl ENSGALP00000019808
OrganismGallus gallus (Chicken) [Reference proteome]
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9YGX8 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 7DB994240DF58007

FASTA66274,061
        10         20         30         40         50         60 
MEVAMVSADS SGCNSHMPYG YAVQARARER ERLAQSRAAA AAAVAAATAA VEGGATGGGG 

        70         80         90        100        110        120 
PYHHYHQEQG RGASSSHGGN ASRSSLPNRQ SGKRWKKGKK RSHHLGSREC GASFPCSELL 

       130        140        150        160        170        180 
PLSGSEERIL KDVSEEEEED EDEDEDDEEE GKLYYSADYG EDEFSYSDQP PDDGGGPGGY 

       190        200        210        220        230        240 
SSVRYSEYEC CERVVINVSG LRFETQLKTL AQFPETLLGD PAKRGRYFDP LRNEYFFDRN 

       250        260        270        280        290        300 
RPSFDAILYY YQSGGRLKRP VNVPFDIFSE EVKFYQLGEE AMLKFREDEG FVKEEEDKAL 

       310        320        330        340        350        360 
PENEFKRQVW LLFEYPESSS PARGIAIVSV LVILISIVIF CLETLPEFRD DKEFIMSLSS 

       370        380        390        400        410        420 
GKGISNESLH LDDGEHTIFN DPFFIVETVC IIWFSFEFTV RCFACPSKAH FLKNIMNIID 

       430        440        450        460        470        480 
IVSILPYFIT LGTDLVQEQG SNGQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL 

       490        500        510        520        530        540 
RASMRELGLL IFFLFIGVIL FSSAVYFAEA DEPATHFQSI PDAFWWAVVT MTTVGYGDMK 

       550        560        570        580        590        600 
PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLMQ NAVSCPYLPT 

       610        620        630        640        650        660 
NLLKKFRSSS SSSTEDKSEY LEMEEGVKES LCVKEKKSQD TGNSSESEKK NCVNSNSVET 


DV

« Hide

References

« Hide 'large scale' references
[1]Rajeevan M., Hu S., Sokolowski B.H.A.
Submitted (DEC-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Cloning and expression of Shaker alpha- and beta-subunits during inner ear development."
Rajeevan M.S., Hu S., Sakai Y., Sokolowski B.H.A.
Brain Res. Mol. Brain Res. 66:83-93(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000019808.
[4]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000019808.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AADN02040146 Genomic DNA. No translation available.
U82365 mRNA. Translation: AAD11454.1.
IPIIPI00590646.
UniGeneGga.422.

3D structure databases

HSSPHSSP built from PDB template 1ZTO based on UniProtKB P15385.
SMRQ9YGX8. Positions 1-77, 192-580.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000019835; ENSGALP00000019808; ENSGALG00000012142.

Phylogenomic databases

GeneTreeENSGT00560000076957.
HOGENOMHOG000231015.
HOVERGENHBG052230.
InParanoidQ9YGX8.
OMADPQSGRG.

Family and domain databases

Gene3D1.20.5.600. 1 hit.
3.30.710.10. 1 hit.
InterProIPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR005821. Ion_trans_dom.
IPR003091. K_chnl.
IPR003968. K_chnl_volt-dep_Kv.
IPR003972. K_chnl_volt-dep_Kv1.
IPR020467. K_chnl_volt-dep_Kv1.4.
IPR012897. K_chnl_volt-dep_Kv1.4_TID.
IPR003131. T1-type_BTB.
[Graphical view]
PANTHERPTHR11537. PTHR11537. 1 hit.
PfamPF00520. Ion_trans. 1 hit.
PF07941. K_channel_TID. 1 hit.
PF02214. K_tetra. 1 hit.
[Graphical view]
PRINTSPR00169. KCHANNEL.
PR01511. KV14CHANNEL.
PR01491. KVCHANNEL.
PR01496. SHAKERCHANEL.
SMARTSM00225. BTB. 1 hit.
[Graphical view]
SUPFAMSSF54695. BTB/POZ_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9YGX8_CHICK
AccessionPrimary (citable) accession number: Q9YGX8
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: April 3, 2013
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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