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Q9YGW6 (Q9YGW6_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 101. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length585 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains FERM domain. SAAS SAAS019749

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processactin filament bundle assembly

Inferred from sequence or structural similarity. Source: UniProtKB

establishment or maintenance of apical/basal cell polarity

Inferred from electronic annotation. Source: Ensembl

leukocyte cell-cell adhesion

Inferred from electronic annotation. Source: Ensembl

membrane to membrane docking

Inferred from electronic annotation. Source: Ensembl

receptor internalization

Inferred from electronic annotation. Source: Ensembl

   Cellular_componentactin cytoskeleton

Inferred from sequence or structural similarity. Source: UniProtKB

actin filament

Inferred from sequence or structural similarity. Source: UniProtKB

apical plasma membrane

Inferred from electronic annotation. Source: Ensembl

cytosol

Inferred from electronic annotation. Source: Ensembl

extrinsic component of membrane

Inferred from sequence or structural similarity. Source: UniProtKB

filopodium

Inferred from electronic annotation. Source: Ensembl

focal adhesion

Inferred from electronic annotation. Source: Ensembl

microvillus

Inferred from electronic annotation. Source: Ensembl

nucleolus

Inferred from electronic annotation. Source: Ensembl

ruffle

Inferred from electronic annotation. Source: Ensembl

uropod

Inferred from electronic annotation. Source: Ensembl

   Molecular_functionactin filament binding

Inferred from sequence or structural similarity. Source: UniProtKB

cell adhesion molecule binding

Inferred from sequence or structural similarity. Source: BHF-UCL

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9YGW6 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 854C6348F783CAEC

FASTA58569,367
        10         20         30         40         50         60 
MPKPINVRVV TVDAELEFAI QPNTTGKQLF DQVVKTIGLR EVWYFGLQYV DNKGFQTWLK 

        70         80         90        100        110        120 
LDKKVSAQEI RKENPLQFRF RAKFFPEDVA EELIQDITQK LFFLQVKEGI LSDEIYCPPE 

       130        140        150        160        170        180 
TAVLLGSYAV QAKFGDYNKD VHKPGYLNSE RLIPQRVMDQ HKLSRDQWEE RIQVWHAEHS 

       190        200        210        220        230        240 
GMLKENAMLE YLKIAQDLEM YGINYFEIKN KKGTDLWLGV DALGLNIYEK DDKLTPKIGF 

       250        260        270        280        290        300 
PWSEIRNISF NDKKFVIKPI DKKAPDFVFY APRLRINKRI LQLCMGNHEL YMRRRKPDTI 

       310        320        330        340        350        360 
EVQQMKAQAR EEKHQKQLER QQLENEKKKR ETIEREKEQM LREKEELLVR LQEYEVKTKR 

       370        380        390        400        410        420 
AEKELSDQIQ RALQLEEERR RAQEEAERLE ADRLAALQAK EELERQNIDQ IKSQEQLAAE 

       430        440        450        460        470        480 
LAEYTAKIAL LEEARKRKES EVEEWQIRAR EAQEDLVKTK EELHLVMTAP PPPPPIYEPV 

       490        500        510        520        530        540 
NYHVHDNLHD EGSEYSAYSA EFSSEGIRND RNEEKRITEA EKNERVQRQL KALTDELAQA 

       550        560        570        580 
RDEDKRTQND IIHSENVRQG RDKYKTLRQI RQGNTKQRID EFEAM 

« Hide

References

« Hide 'large scale' references
[1]"Specific expression of ezrin, a cytoskeletal-membrane linker protein, in a subset of chick retinotectal and sensory projections."
Takahashi M., Yamagata M., Noda M.
Eur. J. Neurosci. 11:545-558(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: White Leghorn EMBL BAA75497.1.
Tissue: Brain EMBL BAA75497.1.
[2]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000022293.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000022293.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN03003294 Genomic DNA. No translation available.
AB019790 mRNA. Translation: BAA75497.1.
RefSeqNP_990216.1. NM_204885.1.
UniGeneGga.40252.

3D structure databases

ProteinModelPortalQ9YGW6.
SMRQ9YGW6. Positions 1-325, 499-585.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9031.ENSGALP00000022293.

Proteomic databases

PaxDbQ9YGW6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000022333; ENSGALP00000022293; ENSGALG00000013742.
GeneID395701.
KEGGgga:395701.

Organism-specific databases

CTD7430.

Phylogenomic databases

eggNOGNOG236035.
GeneTreeENSGT00650000092953.
HOGENOMHOG000007113.
HOVERGENHBG002185.
InParanoidQ9YGW6.
KOK08007.
OrthoDBEOG7BGHK6.
PhylomeDBQ9YGW6.
TreeFamTF313935.

Family and domain databases

Gene3D1.20.80.10. 1 hit.
2.30.29.30. 1 hit.
InterProIPR019749. Band_41_domain.
IPR019750. Band_41_fam.
IPR011174. ERM.
IPR011259. ERM_C_dom.
IPR000798. Ez/rad/moesin_like.
IPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
IPR019748. FERM_central.
IPR019747. FERM_CS.
IPR000299. FERM_domain.
IPR018979. FERM_N.
IPR018980. FERM_PH-like_C.
IPR008954. Moesin_tail.
IPR011993. PH_like_dom.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PfamPF00769. ERM. 1 hit.
PF09380. FERM_C. 1 hit.
PF00373. FERM_M. 1 hit.
PF09379. FERM_N. 1 hit.
[Graphical view]
PIRSFPIRSF002305. ERM. 1 hit.
PRINTSPR00935. BAND41.
PR00661. ERMFAMILY.
SMARTSM00295. B41. 1 hit.
[Graphical view]
SUPFAMSSF47031. SSF47031. 1 hit.
SSF48678. SSF48678. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEPS00660. FERM_1. 1 hit.
PS00661. FERM_2. 1 hit.
PS50057. FERM_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20815771.

Entry information

Entry nameQ9YGW6_CHICK
AccessionPrimary (citable) accession number: Q9YGW6
Secondary accession number(s): F1P3H9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: July 9, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)