Q9YF96 (RL30_AERPE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L30P

Gene names

Name:	rpl30p
Ordered Locus Names:	APE_0345.1

Organism

Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) [Complete proteome] [HAMAP]

Taxonomic identifier

272557 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Aeropyrum › Aeropyrum pernix

Protein attributes

Sequence length	159 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L30P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 159	159	50S ribosomal protein L30P HAMAP-Rule MF_01371		PRO_0000104620

Sequences

	Sequence		Length	Mass (Da)
	Q9YF96 [UniParc]. Last modified June 26, 2007. Version 2. Checksum: B02A30E6FC8CF01C	FASTA	159	18,403
	10 20 30 40 50 60 MPLYAVIRIR GTVDVPPDID KTLYLLRLRR RYTASIYHDS LPGLRDMLRT VEAWTTYGEI 70 80 90 100 110 120 EERVLEELLR KRGRIVGDKP LTDKWVEENL GLSGLGELAE KLVSGELHYH RLEEKGVKPF 130 140 150 FRLHPPRGGF KKSIKRMFRD GGELGYRGSA INELILKML

References

[1]

"Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1." Kawarabayasi Y., Hino Y., Horikawa H., Yamazaki S., Haikawa Y., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Nakazawa H., Takamiya M., Masuda S. , Funahashi T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kubota K., Nakamura Y., Nomura N., Sako Y., Kikuchi H. DNA Res. 6:83-101(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000002 Genomic DNA. Translation: BAA79300.2.
PIR	H72725.
RefSeq	NP_147166.2. NC_000854.2.
3D structure databases
ProteinModelPortal	Q9YF96.
ModBase	Search...
Protein-protein interaction databases
STRING	272557.APE_0345.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAA79300; BAA79300; APE_0345.1.
GeneID	1444563.
KEGG	ape:APE_0345.1.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1841.
HOGENOM	HOG000170918.
KO	K02907.
ProtClustDB	PRK06049.
Enzyme and pathway databases
BioCyc	APER272557:GJD6-262-MONOMER.
Family and domain databases
Gene3D	1.10.15.30. 1 hit. 3.30.1390.20. 2 hits.
HAMAP	MF_01371_A. Ribosomal_L30_A.
InterPro	IPR005997. Ribosomal_L30_arc. IPR023106. Ribosomal_L30_central_dom_arc. IPR016082. Ribosomal_L30_ferredoxin-like. [Graphical view]
Pfam	PF00327. Ribosomal_L30. 1 hit. [Graphical view]
SUPFAM	SSF55129. Ribosomal_L30. 1 hit.
TIGRFAMs	TIGR01309. L30P_arch. 1 hit.
PROSITE	PS00634. RIBOSOMAL_L30. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL30_AERPE

Accession

Primary (citable) accession number: Q9YF96

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2000
Last sequence update:	June 26, 2007
Last modified:	May 1, 2013
This is version 65 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program