Q9YF28 (Q9YF28_AERPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL BAA79368.1

Gene names

Ordered Locus Names:

APE_0412 EMBL BAA79368.1

Organism

Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) [Complete proteome] [HAMAP] EMBL BAA79368.1

Taxonomic identifier

272557 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Aeropyrum › Aeropyrum pernix

Protein attributes

Sequence length	362 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9YF28 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: 46104ABCB2ADF8F4	FASTA	362	39,332
	10 20 30 40 50 60 MAIILGGMVP RPPWKYRLLA AIHAHRNAGD PGADPLVRRA VERLVAVTSR VVFGVEKPGW 70 80 90 100 110 120 ITSGASEGNL LALYTLREEG YRRVVAFDTS HYSIKKSALT LSMELDLLPT HGGRPRLDLL 130 140 150 160 170 180 ERRITPDSVV VATVGTTQEG LVDPVEEIAG VAESVGAAVH VDAAYGGYIA RFLTGKARFR 190 200 210 220 230 240 LEPPVMTVVV DAHKIPEAPP PAGVILASKQ KLLDNLWFES PYIPTGRQFG ILGTRPGGPI 250 260 270 280 290 300 VAAWRRVEDL ERNPGFPRLA SILMRRLRKT LKALERLGYE TPVTPDLPVA CATHPRLGEV 310 320 330 340 350 360 LERLKASGVR VYRCRSPKPC LHVTNYGRLC RARLGSSRSP RGCLRKPLGA SLGNPGVTGL GL

References

[1]

"Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1." Kawarabayasi Y., Hino Y., Horikawa H., Yamazaki S., Haikawa Y., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Nakazawa H., Takamiya M., Masuda S. , Funahashi T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kubota K., Nakamura Y., Nomura N., Sako Y., Kikuchi H. DNA Res. 6:83-101(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000002 Genomic DNA. Translation: BAA79368.1.
PIR	D72734.
RefSeq	NP_147208.1. NC_000854.2.
3D structure databases
ProteinModelPortal	Q9YF28.
ModBase	Search...
Protein-protein interaction databases
STRING	272557.APE_0412.
Protocols and materials databases
DNASU	1444602.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAA79368; BAA79368; APE_0412.
GeneID	1444602.
KEGG	ape:APE_0412.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
KO	K01580.
Enzyme and pathway databases
BioCyc	APER272557:GJD6-302-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9YF28_AERPE

Accession

Primary (citable) accession number: Q9YF28

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	May 1, 2013
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)