Q9YEQ6 (Q9YEQ6_AERPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAA79490.2

Gene names

Ordered Locus Names:

APE_0525.1

Organism

Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) [Complete proteome] [HAMAP]

Taxonomic identifier

272557 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Aeropyrum

Protein attributes

Sequence length	178 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 1ZS7 PDB 2CX0 PDB 2CX1 Complete proteome
Gene Ontology (GO)
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9YEQ6 [UniParc]. Last modified November 14, 2006. Version 2. Checksum: 9C270A0A11CE59D5	FASTA	178	19,824
	10 20 30 40 50 60 MARLEARALS KKERRSLLER LKPYYTRIPF SEKADLRLVK ARTDSGEYEI ITVDGVPCLF 70 80 90 100 110 120 EWSDGRIYPT LQCLKAFGVD WLKGVVLVDK GAAIALAKGA HLMIPGVVGV EGSFTRGDVV 130 140 150 160 170 AALYHETRTP VMVGVAEVDS SALEKLYREK ARGRAVRRVH RLGDALWELA QEVGKRLS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1." Kawarabayasi Y., Hino Y., Horikawa H., Yamazaki S., Haikawa Y., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Nakazawa H., Takamiya M., Masuda S. , Funahashi T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kubota K., Nakamura Y., Nomura N., Sako Y., Kikuchi H. DNA Res. 6:83-101(1999) [PubMed: 10382966] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1.
[2]	"The structure of gene product APE0525 from Aeropyrum pernix." Cuff M.E., Skarina T., Edwards A., Savchenko A., Joachimiak A. Submitted (MAY-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) OF 2-178.
[3]	"Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)." Mizohata E., Morita S., Nagano K., Uda H., Terada T., Shirouzu M., Yokoyama S. Submitted (JUN-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 2-178.
[4]	"Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (tartrate complex)." Mizohata E., Morita S., Nagano K., Uda H., Terada T., Shirouzu M., Yokoyama S. Submitted (JUN-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 2-178.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000002 Genomic DNA. Translation: BAA79490.2.

PIR

F72749.

RefSeq

NP_147299.2. NC_000854.2.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1ZS7	X-ray	1.85	A	2-178	[»]
2CX0	X-ray	1.80	A	2-178	[»]
2CX1	X-ray	1.80	A	2-178	[»]

ProteinModelPortal

Q9YEQ6.

SMR

Q9YEQ6. Positions 1-178.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1444698.

GenomeReviews

Gene locus APE_0525.1 in contig BA000002_GR.

KEGG

ape:APE_0525.1.

NMPDR

fig|272557.1.peg.407.

Organism-specific databases

CMR

Search...

Phylogenomic databases

OMA

SETISQM.

Family and domain databases

InterPro

IPR022430. CHP03684.
IPR002478. PUA.
IPR015947. PUA-like_domain.
IPR016437. Transl_RNA-bd_prd.
IPR004521. Uncharacterised_CHP00451.
[Graphical view]

KO

K07575.

Pfam

PF01472. PUA. 1 hit.
[Graphical view]

PIRSF

PIRSF005067. Tma_RNA-bind_prd. 1 hit.

SMART

SM00359. PUA. 1 hit.
[Graphical view]

SUPFAM

SSF88697. PUA-like. 1 hit.

TIGRFAMs

TIGR03684. ArCOG00985. 1 hit.
TIGR00451. Unchar_dom_2. 1 hit.

PROSITE

PS50890. PUA. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9YEQ6_AERPE

Accession

Primary (citable) accession number: Q9YEQ6

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 14, 2006
Last modified:	November 16, 2011
This is version 61 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)