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Protein
Submitted name:

Putative dehydrogenase

Gene

APE_0912

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciAPER272557:GJD6-663-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative dehydrogenaseImported
Gene namesi
Ordered Locus Names:APE_0912Imported
OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)Imported
Taxonomic identifieri272557 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
Proteomesi
  • UP000002518 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272557.APE_0912.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Z1NX-ray1.80A/B1-260[»]
ProteinModelPortaliQ9YDK1.
SMRiQ9YDK1. Positions 1-260.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9YDK1.

Family & Domainsi

Phylogenomic databases

eggNOGiarCOG01259. Archaea.
COG1028. LUCA.
KOiK00059.
OMAiERVGDPM.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9YDK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLGIQGKLA VVTAGSSGLG FASALELARN GARLLLFSRN REKLEAAASR
60 70 80 90 100
IASLVSGAQV DIVAGDIREP GDIDRLFEKA RDLGGADILV YSTGGPRPGR
110 120 130 140 150
FMELGVEDWD ESYRLLARSA VWVGRRAAEQ MVEKGWGRMV YIGSVTLLRP
160 170 180 190 200
WQDLALSNIM RLPVIGVVRT LALELAPHGV TVNAVLPSLI LTDRVRSLAE
210 220 230 240 250
ERARRSGITV EEALKSMASR IPMGRVGKPE ELASVVAFLA SEKASFITGA
260
VIPVDGGAHI
Length:260
Mass (Da):27,824
Last modified:November 1, 1999 - v1
Checksum:i7FF56FDBFFE20BE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA. Translation: BAA79896.1.
PIRiH72686.

Genome annotation databases

EnsemblBacteriaiBAA79896; BAA79896; APE_0912.
KEGGiape:APE_0912.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA. Translation: BAA79896.1.
PIRiH72686.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Z1NX-ray1.80A/B1-260[»]
ProteinModelPortaliQ9YDK1.
SMRiQ9YDK1. Positions 1-260.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272557.APE_0912.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA79896; BAA79896; APE_0912.
KEGGiape:APE_0912.

Phylogenomic databases

eggNOGiarCOG01259. Archaea.
COG1028. LUCA.
KOiK00059.
OMAiERVGDPM.

Enzyme and pathway databases

BioCyciAPER272557:GJD6-663-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9YDK1.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1Imported.
  2. "A unique catalytic triad revealed by the crystal structure of APE0912, a short-chain dehydrogenase/reductase family protein from Aeropyrum pernix K1."
    Yamamura A., Ichimura T., Mimoto F., Ohtsuka J., Miyazono K., Okai M., Kamo M., Lee W.C., Nagata K., Tanokura M.
    Proteins 70:1640-1645(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).

Entry informationi

Entry nameiQ9YDK1_AERPE
AccessioniPrimary (citable) accession number: Q9YDK1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: June 8, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.