Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9YDC5

- RISC_AERPE

UniProt

Q9YDC5 - RISC_AERPE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Riboflavin synthase

Gene

ribC

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

2 6,7-dimethyl-8-(1-D-ribityl)lumazine = riboflavin + 4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine.

Pathwayi

GO - Molecular functioni

  1. riboflavin synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. riboflavin biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

Riboflavin biosynthesis

Enzyme and pathway databases

BioCyciAPER272557:GJD6-721-MONOMER.
UniPathwayiUPA00275; UER00405.

Names & Taxonomyi

Protein namesi
Recommended name:
Riboflavin synthase (EC:2.5.1.9)
Gene namesi
Name:ribC
Ordered Locus Names:APE_0988
OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Taxonomic identifieri272557 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
ProteomesiUP000002518: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. riboflavin synthase complex Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 155155Riboflavin synthasePRO_0000134858Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272557.APE_0988.

Structurei

3D structure databases

ProteinModelPortaliQ9YDC5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DMRL synthase family.Curated

Phylogenomic databases

eggNOGiCOG1731.
HOGENOMiHOG000227234.
KOiK00793.
OMAiGIVDTTF.

Family and domain databases

Gene3Di3.40.50.960. 1 hit.
InterProiIPR002180. DMRL_synthase.
IPR006399. Ribfl_synth_arc.
[Graphical view]
PfamiPF00885. DMRL_synthase. 1 hit.
[Graphical view]
PIRSFiPIRSF015750. Ribfl_synth_arc. 1 hit.
SUPFAMiSSF52121. SSF52121. 1 hit.
TIGRFAMsiTIGR01506. ribC_arch. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9YDC5 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGKCVGVADT TFARVDMGSV AEEVLRRRLP GYRIVRHTVP GIKDLPGAAK
60 70 80 90 100
RILSMGCEGV ITLGWVGRRE ADKLSYLAAS VGLIMVEVLT GKIVIDVTVH
110 120 130 140 150
EDEAEAPEEL AAIAVDRARK HAENLAALIR EGPEALVKHA GMGLRQGYPD

AGPIK
Length:155
Mass (Da):16,576
Last modified:November 1, 1999 - v1
Checksum:i644B7A1BD313A4F3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000002 Genomic DNA. Translation: BAA79972.1.
PIRiD72696.
RefSeqiNP_147650.1. NC_000854.2.
WP_010866118.1. NC_000854.2.

Genome annotation databases

EnsemblBacteriaiBAA79972; BAA79972; APE_0988.
GeneIDi1445055.
KEGGiape:APE_0988.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000002 Genomic DNA. Translation: BAA79972.1 .
PIRi D72696.
RefSeqi NP_147650.1. NC_000854.2.
WP_010866118.1. NC_000854.2.

3D structure databases

ProteinModelPortali Q9YDC5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272557.APE_0988.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA79972 ; BAA79972 ; APE_0988 .
GeneIDi 1445055.
KEGGi ape:APE_0988.

Phylogenomic databases

eggNOGi COG1731.
HOGENOMi HOG000227234.
KOi K00793.
OMAi GIVDTTF.

Enzyme and pathway databases

UniPathwayi UPA00275 ; UER00405 .
BioCyci APER272557:GJD6-721-MONOMER.

Family and domain databases

Gene3Di 3.40.50.960. 1 hit.
InterProi IPR002180. DMRL_synthase.
IPR006399. Ribfl_synth_arc.
[Graphical view ]
Pfami PF00885. DMRL_synthase. 1 hit.
[Graphical view ]
PIRSFi PIRSF015750. Ribfl_synth_arc. 1 hit.
SUPFAMi SSF52121. SSF52121. 1 hit.
TIGRFAMsi TIGR01506. ribC_arch. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1.

Entry informationi

Entry nameiRISC_AERPE
AccessioniPrimary (citable) accession number: Q9YDC5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1999
Last modified: October 1, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3