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Q9YDC5

- RISC_AERPE

UniProt

Q9YDC5 - RISC_AERPE

Protein

Riboflavin synthase

Gene

ribC

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 1 (01 Nov 1999)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    2 6,7-dimethyl-8-(1-D-ribityl)lumazine = riboflavin + 4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine.

    Pathwayi

    GO - Molecular functioni

    1. riboflavin synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. riboflavin biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Transferase

    Keywords - Biological processi

    Riboflavin biosynthesis

    Enzyme and pathway databases

    BioCyciAPER272557:GJD6-721-MONOMER.
    UniPathwayiUPA00275; UER00405.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Riboflavin synthase (EC:2.5.1.9)
    Gene namesi
    Name:ribC
    Ordered Locus Names:APE_0988
    OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
    Taxonomic identifieri272557 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
    ProteomesiUP000002518: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. riboflavin synthase complex Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 155155Riboflavin synthasePRO_0000134858Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi272557.APE_0988.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9YDC5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DMRL synthase family.Curated

    Phylogenomic databases

    eggNOGiCOG1731.
    HOGENOMiHOG000227234.
    KOiK00793.
    OMAiGIVDTTF.

    Family and domain databases

    Gene3Di3.40.50.960. 1 hit.
    InterProiIPR002180. DMRL_synthase.
    IPR006399. Ribfl_synth_arc.
    [Graphical view]
    PfamiPF00885. DMRL_synthase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF015750. Ribfl_synth_arc. 1 hit.
    SUPFAMiSSF52121. SSF52121. 1 hit.
    TIGRFAMsiTIGR01506. ribC_arch. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9YDC5-1 [UniParc]FASTAAdd to Basket

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    MGKCVGVADT TFARVDMGSV AEEVLRRRLP GYRIVRHTVP GIKDLPGAAK    50
    RILSMGCEGV ITLGWVGRRE ADKLSYLAAS VGLIMVEVLT GKIVIDVTVH 100
    EDEAEAPEEL AAIAVDRARK HAENLAALIR EGPEALVKHA GMGLRQGYPD 150
    AGPIK 155
    Length:155
    Mass (Da):16,576
    Last modified:November 1, 1999 - v1
    Checksum:i644B7A1BD313A4F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000002 Genomic DNA. Translation: BAA79972.1.
    PIRiD72696.
    RefSeqiNP_147650.1. NC_000854.2.
    WP_010866118.1. NC_000854.2.

    Genome annotation databases

    EnsemblBacteriaiBAA79972; BAA79972; APE_0988.
    GeneIDi1445055.
    KEGGiape:APE_0988.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000002 Genomic DNA. Translation: BAA79972.1 .
    PIRi D72696.
    RefSeqi NP_147650.1. NC_000854.2.
    WP_010866118.1. NC_000854.2.

    3D structure databases

    ProteinModelPortali Q9YDC5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272557.APE_0988.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA79972 ; BAA79972 ; APE_0988 .
    GeneIDi 1445055.
    KEGGi ape:APE_0988.

    Phylogenomic databases

    eggNOGi COG1731.
    HOGENOMi HOG000227234.
    KOi K00793.
    OMAi GIVDTTF.

    Enzyme and pathway databases

    UniPathwayi UPA00275 ; UER00405 .
    BioCyci APER272557:GJD6-721-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.960. 1 hit.
    InterProi IPR002180. DMRL_synthase.
    IPR006399. Ribfl_synth_arc.
    [Graphical view ]
    Pfami PF00885. DMRL_synthase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF015750. Ribfl_synth_arc. 1 hit.
    SUPFAMi SSF52121. SSF52121. 1 hit.
    TIGRFAMsi TIGR01506. ribC_arch. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1.

    Entry informationi

    Entry nameiRISC_AERPE
    AccessioniPrimary (citable) accession number: Q9YDC5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: November 1, 1999
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3