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Protein

Protein APE_1056.1

Gene

APE_1056.1

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciAPER272557:GJD6-754-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein APE_1056.1UniRule annotation
Gene namesi
Ordered Locus Names:APE_1056.1
OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Taxonomic identifieri272557 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
Proteomesi
  • UP000002518 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 231231Protein APE_1056.1PRO_0000142374Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272557.APE_1056.1.

Structurei

3D structure databases

ProteinModelPortaliQ9YD56.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 214186AMMECR1UniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 AMMECR1 domain.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01336. Archaea.
COG2078. LUCA.
HOGENOMiHOG000223417.
KOiK09141.

Family and domain databases

Gene3Di3.30.700.20. 1 hit.
HAMAPiMF_00645. AMMECR1.
InterProiIPR023473. AMMECR1.
IPR002733. AMMECR1_domain.
IPR027485. AMMECR1_N.
IPR027623. AmmeMemoSam_A.
IPR023472. Uncharacterised_MJ0810.
[Graphical view]
PANTHERiPTHR13016. PTHR13016. 1 hit.
PfamiPF01871. AMMECR1. 1 hit.
[Graphical view]
SUPFAMiSSF143447. SSF143447. 1 hit.
TIGRFAMsiTIGR04335. AmmeMemoSam_A. 1 hit.
TIGR00296. TIGR00296. 1 hit.
PROSITEiPS51112. AMMECR1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9YD56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGGVRIARA RGPPIEPEEL DDADGEALVR IARRAVEEWV EHGRRLDVEA
60 70 80 90 100
GGKLGRPGAA FVTLERRSGD GWELRGCIGV VRPVLPLVEA VVTAAVDAAS
110 120 130 140 150
SDPRFEPLSR EELDRVRVEV TVLGSMEPLP KKPHERPALV EVGLHGLYVE
160 170 180 190 200
KPPYAGLLLP QVAVDEGWDP ILFLTWACIK AGLPGTCWLR EDVEIYRFRA
210 220 230
AVWRETEPRG PVVRRDLARE AAAKGVNARV S
Length:231
Mass (Da):25,381
Last modified:June 26, 2007 - v2
Checksum:i8E394DB5E2191746
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA. Translation: BAA80041.2.
PIRiA72705.

Genome annotation databases

EnsemblBacteriaiBAA80041; BAA80041; APE_1056.1.
KEGGiape:APE_1056.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA. Translation: BAA80041.2.
PIRiA72705.

3D structure databases

ProteinModelPortaliQ9YD56.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272557.APE_1056.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA80041; BAA80041; APE_1056.1.
KEGGiape:APE_1056.1.

Phylogenomic databases

eggNOGiarCOG01336. Archaea.
COG2078. LUCA.
HOGENOMiHOG000223417.
KOiK09141.

Enzyme and pathway databases

BioCyciAPER272557:GJD6-754-MONOMER.

Family and domain databases

Gene3Di3.30.700.20. 1 hit.
HAMAPiMF_00645. AMMECR1.
InterProiIPR023473. AMMECR1.
IPR002733. AMMECR1_domain.
IPR027485. AMMECR1_N.
IPR027623. AmmeMemoSam_A.
IPR023472. Uncharacterised_MJ0810.
[Graphical view]
PANTHERiPTHR13016. PTHR13016. 1 hit.
PfamiPF01871. AMMECR1. 1 hit.
[Graphical view]
SUPFAMiSSF143447. SSF143447. 1 hit.
TIGRFAMsiTIGR04335. AmmeMemoSam_A. 1 hit.
TIGR00296. TIGR00296. 1 hit.
PROSITEiPS51112. AMMECR1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1.

Entry informationi

Entry nameiY1056_AERPE
AccessioniPrimary (citable) accession number: Q9YD56
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2003
Last sequence update: June 26, 2007
Last modified: November 11, 2015
This is version 70 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.