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Q9YD20 (RNP4_AERPE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribonuclease P protein component 4

Short name=RNase P component 4
EC=3.1.26.5
Gene names
Name:rnp4
Ordered Locus Names:APE_1092.1
OrganismAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) [Complete proteome] [HAMAP]
Taxonomic identifier272557 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum

Protein attributes

Sequence length163 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity. HAMAP-Rule MF_00757

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. HAMAP-Rule MF_00757

Subunit structure

Consists of a catalytic RNA component and at least 4 protein subunits Potential.

Sequence similarities

Belongs to the eukaryotic/archaeal RNase P protein component 4 family.

Ontologies

Keywords
   Biological processtRNA processing
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtRNA 5'-leader removal

Inferred from electronic annotation. Source: InterPro

   Molecular_functionribonuclease P activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 163163Ribonuclease P protein component 4 HAMAP-Rule MF_00757
PRO_0000153848

Sequences

Sequence LengthMass (Da)Tools
Q9YD20 [UniParc].

Last modified June 26, 2007. Version 2.
Checksum: FA24D0F183ABB5EA

FASTA16318,167
        10         20         30         40         50         60 
MKSRRSRCRR SFTTLVRREE ERLARWALEL ARRGLTGEAR RVAEQLFQLA ASTRVRPPRR 

        70         80         90        100        110        120 
VKRLFCKNCR TPLIPGLTAR VRLRSQGGMS YTVVTCLSCG WIHRYPYRKG PRGGAPISPP 

       130        140        150        160 
AAEYGSGGRD SGEREDKGPQ GPPRQGGRDN RQGGGHQGGP KGD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000002 Genomic DNA. Translation: BAA80077.2.
PIRE72709.
RefSeqNP_147712.2. NC_000854.2.

3D structure databases

ProteinModelPortalQ9YD20.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272557.APE_1092.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA80077; BAA80077; APE_1092.1.
GeneID1445786.
KEGGape:APE_1092.1.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2023.
KOK03540.

Enzyme and pathway databases

BioCycAPER272557:GJD6-773-MONOMER.

Family and domain databases

HAMAPMF_00757. RNase_P_4.
InterProIPR016432. RNase_P_comp-4.
IPR007175. Rpr2.
[Graphical view]
PANTHERPTHR14742. PTHR14742. 1 hit.
PfamPF04032. Rpr2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRNP4_AERPE
AccessionPrimary (citable) accession number: Q9YD20
Entry history
Integrated into UniProtKB/Swiss-Prot: July 5, 2004
Last sequence update: June 26, 2007
Last modified: April 16, 2014
This is version 54 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families