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Reviewed, UniProtKB/Swiss-Prot Q9YBD6 (PTH_AERPE)

Last modified February 9, 2010. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Peptidyl-tRNA hydrolase
      Short name=PTH
    EC=3.1.1.29
Gene names
Name: pth
Ordered Locus Names: APE_1661
OrganismAeropyrum pernix [Complete proteome] [HAMAP]
Taxonomic identifier56636 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum

Protein attributes

Sequence length124 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Function

The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00628

Catalytic activity

N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00628

Subcellular location

Cytoplasm By similarity HAMAP MF_00628.

Sequence similarities

Belongs to the PTH2 family.

Ontologies

Keywords
   Cellular componentCytoplasm
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionaminoacyl-tRNA hydrolase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 124124Peptidyl-tRNA hydrolase HAMAP MF_00628
PRO_0000120287

Sequences

Sequence LengthMass (Da)Tools
Q9YBD6-1 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: 5AA6F0E1CEB576CC

FASTA12413,462
        10         20         30         40         50         60 
MTGEGYKQAI VVRRDLGMGR GKAAAQAAHA SCEAVFLILE SGRPEWRRWL EMWRLQGQAK 

        70         80         90        100        110        120 
VVLRVESLAE LQEVYSKAVE EGLPASFVRD AGKTQLEPGT PTAAAVGPAP SRLVDRITGG 


LKLF 

« Hide

References

[1]"Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1."
Kawarabayasi Y., Hino Y., Horikawa H., Yamazaki S., Haikawa Y., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Nakazawa H., Takamiya M., Masuda S. expand/collapse author list , Funahashi T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kubota K., Nakamura Y., Nomura N., Sako Y., Kikuchi H.
DNA Res. 6:83-101(1999) [PubMed: 10382966] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000002 Genomic DNA. Translation: BAA80662.1.
PIRA72547.
RefSeqNP_148083.1.

3D structure databases

SMRQ9YBD6. Positions 3-124.
ModBaseSearch...

Genome annotation databases

GeneID1446157.
GenomeReviewsGene locus APE_1661 in contig BA000002_GR.
KEGGape:APE_1661.
NMPDRfig|272557.1.peg.1191.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG526257.
OMAIQRRNPE.

Enzyme and pathway databases

BioCycAPER272557:APE1661-MONOMER.
BRENDA3.1.1.29. 256344.

Family and domain databases

HAMAPMF_00628. Pept_tRNA_hydro_arch.
[Tree]
InterProIPR002833. Pep_tRNA_hydro_PTH2.
[Graphical view]
PfamPF01981. PTH2. 1 hit.
[Graphical view]
TIGRFAMsTIGR00283. Pep_tRNA_hydro_PTH2. 1 hit.
ProtoNetSearch...

Entry information

Entry namePTH_AERPE
AccessionPrimary (citable) accession number: Q9YBD6
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1999
Last modified: February 9, 2010
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents