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Protein

DNA-directed RNA polymerase subunit H

Gene

rpoH

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferase, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit HUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:rpoHUniRule annotation
Ordered Locus Names:APE_1856a
ORF Names:APES061
OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Taxonomic identifieri272557 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
Proteomesi
  • UP000002518 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymerase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001460881 – 90DNA-directed RNA polymerase subunit HAdd BLAST90

Proteomic databases

PRIDEiQ9YAT3

Interactioni

Protein-protein interaction databases

STRINGi272557.APE_1856a

Structurei

3D structure databases

ProteinModelPortaliQ9YAT3
SMRiQ9YAT3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04258 Archaea
COG2012 LUCA
HOGENOMiHOG000109413
KOiK03053
OMAiPKIYHDD
OrthoDBiPOG093Z0M57

Family and domain databases

Gene3Di3.90.940.20, 1 hit
HAMAPiMF_00025 RNApol_RpoH_RPB5, 1 hit
InterProiView protein in InterPro
IPR000783 RNA_pol_subH/Rpb5_C
IPR020608 RNA_pol_subH/Rpb5_CS
IPR035913 RPB5-like
IPR020609 RpoH/RPB5
PfamiView protein in Pfam
PF01191 RNA_pol_Rpb5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155 RNA_pol_subH/Rpb5_C, 1 hit
SUPFAMiSSF55287 SSF55287, 1 hit
PROSITEiView protein in PROSITE
PS01110 RNA_POL_H_23KD, 1 hit

Sequencei

Sequence statusi: Complete.

Q9YAT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSKTRKSSR VILEHEYVPE HRLLSIEEAV QVLKMLGIKP WQLPKISVND
60 70 80 90
PIARLLKAKP GDIIEITRRS YTAGEAKYYR FVVAYQKGVK
Length:90
Mass (Da):10,368
Last modified:November 1, 1999 - v1
Checksum:iC3D22EF520D1352C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA Translation: BAA80865.1
PIRiD72572

Genome annotation databases

EnsemblBacteriaiBAA80865; BAA80865; APE_1856a
KEGGiape:APE_1856a

Similar proteinsi

Entry informationi

Entry nameiRPOH_AERPE
AccessioniPrimary (citable) accession number: Q9YAT3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1999
Last modified: May 23, 2018
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health