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Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:APE_2371.1
OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Taxonomic identifieri272557 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
Proteomesi
  • UP000002518 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001373431 – 23530S ribosomal protein S6eAdd BLAST235

Interactioni

Protein-protein interaction databases

STRINGi272557.APE_2371.1.

Structurei

3D structure databases

ProteinModelPortaliQ9Y9B6.
SMRiQ9Y9B6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS6 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000009829.
KOiK02991.
OMAiFRARAWQ.
OrthoDBiPOG093Z0FEK.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiView protein in InterPro
IPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiView protein in Pfam
PF01092. Ribosomal_S6e. 1 hit.
SMARTiView protein in SMART
SM01405. Ribosomal_S6e. 1 hit.
PROSITEiView protein in PROSITE
PS00578. RIBOSOMAL_S6E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9Y9B6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEERPPLRI VISDPRAGDR VVRVKVKGVE DIEYTDDMRK TKESDRRRLP
60 70 80 90 100
IARVSRKLYE ELNLGEVGVL TLRFTTPDGK KVKVPFKAEV KEGLEDNVVE
110 120 130 140 150
VNMELLGEAA GELETEADAF RAKSWQIAVP DDVHVKLAGL EIGDVFDGGL
160 170 180 190 200
IGMPGLKFKI RGGTDATGIP MHPGVPGSGR YKVLLAGPPG FHPRERGERR
210 220 230
RKSVRGRMIP DPRGERRKTA LAQLNIVIHY GDKEE
Length:235
Mass (Da):26,151
Last modified:October 31, 2006 - v2
Checksum:i65EDC33EFCF4CB71
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA. Translation: BAA81384.2.
PIRiH72465.

Genome annotation databases

EnsemblBacteriaiBAA81384; BAA81384; APE_2371.1.
KEGGiape:APE_2371.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS6E_AERPE
AccessioniPrimary (citable) accession number: Q9Y9B6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: October 31, 2006
Last modified: April 12, 2017
This is version 82 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families