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Q9Y8H3 (GLGB_EMENI) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
1,4-alpha-glucan-branching enzyme

EC=2.4.1.18
Alternative name(s):
Glycogen-branching enzyme
Gene names
Name:be1
ORF Names:AN2314
OrganismEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) [Reference proteome]
Taxonomic identifier227321 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus

Protein attributes

Sequence length684 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

Pathway

Glycan biosynthesis; glycogen biosynthesis.

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.

Sequence caution

The sequence BAA78714.1 differs from that shown. Reason: Probable sequencing error places a 'ESWIKTV' sequence at a wrong position.

The sequence EAA64425.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 6846841,4-alpha-glucan-branching enzyme
PRO_0000188782

Sites

Active site3401Nucleophile By similarity
Active site3951Proton donor By similarity

Experimental info

Sequence conflict34 – 407Missing in BAA78714. Ref.1
Sequence conflict601N → NESWIKTV in BAA78714. Ref.1
Sequence conflict1231K → KVK in BAA78714. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q9Y8H3 [UniParc].

Last modified November 16, 2011. Version 3.
Checksum: D04B9091A92521BD

FASTA68478,419
        10         20         30         40         50         60 
MTSTAPSDGT GIIDLDPWLE PFREAIKRRF DYVESWIKTV DEVEGGLDKF SKGYEKFGFN 

        70         80         90        100        110        120 
VSETGDITYR EWAPNAIEAA LVGDFNNWDT KANPMTRDNF GVWEIALPAK NGTPVIPHDS 

       130        140        150        160        170        180 
KVKITMVTRS GERIYRIPAW IKRVVQDLNV SPIYESVFWN PPKAERYNFQ HARPKKPESL 

       190        200        210        220        230        240 
RIYEAHVGIS SPDTRVATYK EFTANMLPRI KYLGYNAIQL MAIMEHAYYA SFGYQVNNFF 

       250        260        270        280        290        300 
AASSRYGKPE DLKELVDTAH SMGLVVLLDV VHSHASKNVD DGLNMFDGSD HLYFHSGSKG 

       310        320        330        340        350        360 
QHELWDSRLF NYGNHEVLRF LLSNLRFWME EYGFDGFRFD GVTSMLYTHH GIGTGFSGGY 

       370        380        390        400        410        420 
HEYFGPAVDD DGVMYLALAN EMLHRLYPDC ITVAEDVSGM PALCLPHGLG GVGFDYRLAM 

       430        440        450        460        470        480 
AIPDMYIKLL KEKSDNDWDI GNLAFTLTNR RHGEKTIAYA ESHDQALVGD KSLMMWLCDK 

       490        500        510        520        530        540 
EMYTHMSVLT EFTPVIERGM ALHKMIRLVT HALGGEGYLN FEGNEFGHPE WLDFPRAGNN 

       550        560        570        580        590        600 
NSFWYARRQL NLTEDHLLRY RFLNEFDRAM QLTESKYGWL HAPQAYISLK HEGDKVLVFE 

       610        620        630        640        650        660 
RADLLWIFNF HPTESFTDYR VGVEQAGTYR VVLDTDDQAF GGLGRIDQGT RFFTTDMEWN 

       670        680 
GRRNYLQVYI PTRTALALAL EETL 

« Hide

References

« Hide 'large scale' references
[1]"Emericella nidulans putative branching enzyme."
Kobayashi T., Tanaka A., Matsuno A., Kato M., Tsukagoshi N.
Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae."
Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S., Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J., Kapitonov V., Jurka J., Scazzocchio C., Farman M.L., Butler J., Purcell S., Harris S., Braus G.H. expand/collapse author list , Draht O., Busch S., D'Enfert C., Bouchier C., Goldman G.H., Bell-Pedersen D., Griffiths-Jones S., Doonan J.H., Yu J., Vienken K., Pain A., Freitag M., Selker E.U., Archer D.B., Penalva M.A., Oakley B.R., Momany M., Tanaka T., Kumagai T., Asai K., Machida M., Nierman W.C., Denning D.W., Caddick M.X., Hynes M., Paoletti M., Fischer R., Miller B.L., Dyer P.S., Sachs M.S., Osmani S.A., Birren B.W.
Nature 438:1105-1115(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.
[3]"The 2008 update of the Aspergillus nidulans genome annotation: a community effort."
Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J., Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E., Fekete E., Flipphi M., Estrada C.G. expand/collapse author list , Geysens S., Goldman G., de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I., Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B., van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J., de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W., Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.
Fungal Genet. Biol. 46:S2-13(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB026630 mRNA. Translation: BAA78714.1. Sequence problems.
AACD01000038 Genomic DNA. Translation: EAA64425.1. Sequence problems.
BN001307 Genomic DNA. Translation: CBF86590.1.
RefSeqXP_659918.1. XM_654826.1.

3D structure databases

ProteinModelPortalQ9Y8H3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING162425.CADANIAP00009008.

Protein family/group databases

CAZyCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCADANIAT00009008; CADANIAP00009008; CADANIAG00009008.
GeneID2875628.
KEGGani:AN2314.2.

Phylogenomic databases

eggNOGCOG0296.
HOGENOMHOG000175159.
KOK00700.
OMAGPRGTHD.
OrthoDBEOG7647B5.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGB_EMENI
AccessionPrimary (citable) accession number: Q9Y8H3
Secondary accession number(s): C8VN63, Q5BAW6
Entry history
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: November 16, 2011
Last modified: June 11, 2014
This is version 80 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries