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Protein

Actin-like protein arp5

Gene

arp5

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chromatin regulator

Keywords - Biological processi

DNA damage, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Actin-like protein arp5
Gene namesi
Name:arp5
ORF Names:SPBC365.10
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC365.10.
PomBaseiSPBC365.10. arp5.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • Ino80 complex Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 721721Actin-like protein arp5PRO_0000310307Add
BLAST

Proteomic databases

MaxQBiQ9Y7X8.

Interactioni

Subunit structurei

Component of the INO80 chromatin remodeling complex.1 Publication

Protein-protein interaction databases

BioGridi277546. 1 interaction.
MINTiMINT-4719829.

Structurei

3D structure databases

ProteinModelPortaliQ9Y7X8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili266 – 368103Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the actin family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

HOGENOMiHOG000171615.
InParanoidiQ9Y7X8.
KOiK11672.
OMAiCQFIGYD.
OrthoDBiEOG092C0R1R.
PhylomeDBiQ9Y7X8.

Family and domain databases

InterProiIPR004000. Actin.
IPR027664. Arp5.
[Graphical view]
PANTHERiPTHR11937. PTHR11937. 2 hits.
PTHR11937:SF16. PTHR11937:SF16. 2 hits.
PfamiPF00022. Actin. 2 hits.
[Graphical view]
SMARTiSM00268. ACTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9Y7X8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIYAVREPV FSGPTPSFQN VSNDIPLVID NGSWQLRAGW GGEKDPKLVF
60 70 80 90 100
DNLVSRYRDR KLSRTSTLVG NDTLIEVGSR SIARSPFERN VISNWDLMEQ
110 120 130 140 150
VLDYTFLKLG IDRMEHPICM TEPLANPTYV RSTMTELLFE LYNAPSVAYG
160 170 180 190 200
IDGLFSFYHN TKPSSSGIVL NLGNAASHVI PVLNGERILS EAKRISWGGS
210 220 230 240 250
QSSSYLLKLF QIKYPSFPIK MLPSQAELLM HDHCHVSSDY THDIAHALDR
260 270 280 290 300
DILERDEIVL QFPYTEAAAQ EKSQEELELI AERKRESGRR LQAQAAIKRK
310 320 330 340 350
EKAAERDREL ATLTELQQQS LVLSRRAFQR ALEEAGFEDE SQLNAQVKNV
360 370 380 390 400
QAKIRRAQRD QQRQEESEGS LDVTEIDVEQ AFPLLNVPDA ELDEAGLRQK
410 420 430 440 450
RHQRLMKANY DARVRAKAEK AIEEAAEAER AEADERLRLE NFSTWVNEKR
460 470 480 490 500
ETHKILLEKI SKNKRLKFEL NDRKSHASQM RMKSLATLAS EQPIQKRKRK
510 520 530 540 550
DQSEDNFGAR DEDWKVYHDV LTAEQLEEER KKLLDQIYSL EKQLLEYDSQ
560 570 580 590 600
FTQANTYDTL NDPRATLLYA FTRGVSDFDV NDVAQAFQLH LNVEQIRVPE
610 620 630 640 650
VIFSPSIVGI DQAGILEIMR SILQRHSLEE QQKLVSNVLI TGGLGSLPGM
660 670 680 690 700
ETRIKRELTS IMPVGSSINV FRASNPLLDA WKGASEWSVT EKFKAAKVTR
710 720
EEYLEKGPEY IKEHSLGNIN S
Length:721
Mass (Da):82,364
Last modified:November 1, 1999 - v1
Checksum:iB847A16E87A9A148
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB44762.1.
PIRiT40317.
RefSeqiNP_596039.1. NM_001021949.2.

Genome annotation databases

EnsemblFungiiSPBC365.10.1; SPBC365.10.1:pep; SPBC365.10.
GeneIDi2541031.
KEGGispo:SPBC365.10.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB44762.1.
PIRiT40317.
RefSeqiNP_596039.1. NM_001021949.2.

3D structure databases

ProteinModelPortaliQ9Y7X8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277546. 1 interaction.
MINTiMINT-4719829.

Proteomic databases

MaxQBiQ9Y7X8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC365.10.1; SPBC365.10.1:pep; SPBC365.10.
GeneIDi2541031.
KEGGispo:SPBC365.10.

Organism-specific databases

EuPathDBiFungiDB:SPBC365.10.
PomBaseiSPBC365.10. arp5.

Phylogenomic databases

HOGENOMiHOG000171615.
InParanoidiQ9Y7X8.
KOiK11672.
OMAiCQFIGYD.
OrthoDBiEOG092C0R1R.
PhylomeDBiQ9Y7X8.

Miscellaneous databases

PROiQ9Y7X8.

Family and domain databases

InterProiIPR004000. Actin.
IPR027664. Arp5.
[Graphical view]
PANTHERiPTHR11937. PTHR11937. 2 hits.
PTHR11937:SF16. PTHR11937:SF16. 2 hits.
PfamiPF00022. Actin. 2 hits.
[Graphical view]
SMARTiSM00268. ACTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiARP5_SCHPO
AccessioniPrimary (citable) accession number: Q9Y7X8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: November 1, 1999
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.