Q9Y7P4 (RML2_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
60S ribosomal protein rml2, mitochondrial
Short name=L2

Gene names

Name:	rml2
ORF Names:	SPCC16C4.15

Organism

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)

Taxonomic identifier

284812 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces

Protein attributes

Sequence length	318 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subunit structure	Component of the mitochondrial large ribosomal subunit By similarity. UniProtKB P32611
Subcellular location	Mitochondrion By similarity UniProtKB P32611.
Sequence similarities	Belongs to the ribosomal protein L2P family.

Ontologies

Keywords
Cellular component	Mitochondrion
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from sequence or structural similarity. Source: GeneDB_Spombe
Cellular component	mitochondrial large ribosomal subunit Inferred from sequence or structural similarity. Source: GeneDB_Spombe
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from sequence or structural similarity. Source: GeneDB_Spombe transferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 318	318	60S ribosomal protein rml2, mitochondrial		PRO_0000318134

Sequences

	Sequence		Length	Mass (Da)
	Q9Y7P4 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: 4CBC78529658F93E	FASTA	318	35,211
	10 20 30 40 50 60 MLLRPKTKFE IKTYKPISPG LRHLKRPVSD YLWKGKPFRP LTVAKRKKGG RNETGRITVR 70 80 90 100 110 120 HQGGGHKQRI RLVDFERKVP GVHRVIRIEY DPGRSGHIAL VEKLNSETAN KSYILACDGL 130 140 150 160 170 180 REGDTVESFR SLLKTGSNGE PVEMDPVLAA EIEDGTFAAK NLKPGNCFPL RLIPIGTVIH 190 200 210 220 230 240 AIGVNPNQKA KLCRSAGSSA RIIAFDGKYA IVRLQSGEER KILDTSFATI GVVSNIYWQH 250 260 270 280 290 300 RQLGKAGRSR WLGIRPTVRG TAMNPCDHPH GGGGGKSIGN KPSQSPWGVL AKGGYKTRRG 310 KNVNKLLVRD RPRGKEKR

References

[1]

"The genome sequence of Schizosaccharomyces pombe." Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P. Nature 415:871-880(2002) [PubMed: 11859360] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 972 / ATCC 24843.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU329672 Genomic DNA. Translation: CAB38631.1.
PIR	T41105.
RefSeq	NP_587925.1. NM_001022916.1.
3D structure databases
HSSP	HSSP built from PDB template 2AW4 based on UniProtKB P60422.
ProteinModelPortal	Q9Y7P4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9Y7P4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2539321.
GenomeReviews	Gene locus rml2 in contig CU329672_GR.
KEGG	spo:SPCC16C4.15.
NMPDR	fig|4896.1.peg.263.
Organism-specific databases
GeneDB_Spombe	SPCC16C4.15.
Phylogenomic databases
eggNOG	fuNOG04946.
GeneTree	EFGT00050000005193.
HOGENOM	HBG748739.
OMA	QSNINWG.
OrthoDB	EOG4W9NCQ.
Gene expression databases
ArrayExpress	Q9Y7P4.
Family and domain databases
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022666. Rbsml_prot_L2_RNA-bd_dom. IPR002171. Ribosomal_L2. IPR014726. Ribosomal_L2_3. IPR005880. Ribosomal_L2_bac-type. IPR022669. Ribosomal_L2_C. IPR022671. Ribosomal_L2_CS. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit. G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:4.10.950.10. Ribosomal_L2. 1 hit.
PANTHER	PTHR13691:SF5. Ribosom_L2_bac. 1 hit. PTHR13691. Ribosomal_L2. 1 hit.
Pfam	PF00181. Ribosomal_L2. 1 hit. PF03947. Ribosomal_L2_C. 1 hit. [Graphical view]
PIRSF	PIRSF002158. Ribosomal_L2. 1 hit.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01171. RplB_bact. 1 hit.
PROSITE	PS00467. RIBOSOMAL_L2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RML2_SCHPO

Accession

Primary (citable) accession number: Q9Y7P4

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 5, 2008
Last sequence update:	November 1, 1999
Last modified:	December 14, 2011
This is version 84 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program