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Reviewed, UniProtKB/Swiss-Prot Q9Y7N4 (OXDA_SCHPO)

Last modified January 19, 2010. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    D-amino-acid oxidase
      Short name=DAMOX
      Short name=DAAO
      Short name=DAO
    EC=1.4.3.3
Gene names
Name: dao1
ORF Names: SPCC1450.07c
OrganismSchizosaccharomyces pombe (Fission yeast) [Complete proteome]
Taxonomic identifier4896 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces

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Protein attributes

Sequence length348 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Catalytic activity

A D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2.

Cofactor

FAD By similarity.

Sequence similarities

Belongs to the DAMOX/DASOX family.

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Ontologies

Keywords
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processoxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionD-amino-acid oxidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 348348D-amino-acid oxidase
PRO_0000315956

Regions

Nucleotide binding10 – 2415FAD By similarity
Nucleotide binding40 – 412FAD By similarity
Nucleotide binding51 – 522FAD By similarity
Nucleotide binding56 – 583FAD By similarity
Nucleotide binding323 – 3275FAD By similarity

Sites

Binding site1681FAD; via amide nitrogen and carbonyl oxygen By similarity
Binding site1881FAD By similarity
Binding site2321Substrate By similarity
Binding site2951Substrate By similarity
Binding site3241Substrate; via carbonyl oxygen By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q9Y7N4-1 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: 1764FF1F44A9A585

FASTA34838,714
        10         20         30         40         50         60 
MTKENKPRDI VIVGAGVIGL TTAWILSDLG LAPRIKVIAK YTPEDRSVEY TSPWAGANFC 

        70         80         90        100        110        120 
SISATDDNAL RWDKITYHRF AYLAKTRPEA GIRFADLREL WEYEPKHDKI RSWNTYVRDF 

       130        140        150        160        170        180 
KVIPEKDLPG ECIYGHKATT FLINAPHYLN YMYKLLIEAG VEFEKKELSH IKETVEETPE 

       190        200        210        220        230        240 
ASVVFNCTGL WASKLGGVED PDVYPTRGHV VLVKAPHVTE TRILNGKNSD TYIIPRPLNG 

       250        260        270        280        290        300 
GVICGGFMQP GNWDREIHPE DTLDILKRTS ALMPELFHGK GPEGAEIIQE CVGFRPSRKG 

       310        320        330        340 
GARVELDVVP GTSVPLVHDY GASGTGYQAG YGMALDSVML ALPKIKLA

« Hide

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References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed: 11859360] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 38366 / 972.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU329672 Genomic DNA. Translation: CAB40174.1.
PIRT40989.
RefSeqNP_588306.1.

3D structure databases

HSSPHSSP built from PDB template 1C0P based on UniProtKB P80324.
SMRQ9Y7N4. Positions 5-337.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9Y7N4.

Genome annotation databases

GeneID2539033.
GenomeReviewsGene locus dao1 in contig CU329672_GR.
KEGGspo:SPCC1450.07c.
NMPDRfig|4896.1.peg.644.

Organism-specific databases

GeneDB_SpombeSPCC1450.07c.

Phylogenomic databases

eggNOGfuNOG06220.
HOGENOMHBG735740.
OMAFCSISAT.
OrthoDBEOG9HDV9Q.
PhylomeDBQ9Y7N4.

Enzyme and pathway databases

BRENDA1.4.3.3. 653.

Gene expression databases

ArrayExpressQ9Y7N4.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameOXDA_SCHPO
AccessionPrimary (citable) accession number: Q9Y7N4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 1, 1999
Last modified: January 19, 2010
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

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Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents