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Reviewed, UniProtKB/Swiss-Prot Q9Y675 (SNURF_HUMAN)

Last modified June 16, 2009. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    SNRPN upstream reading frame protein
Gene names
Name: SNURF
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length71 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Subcellular location

Nucleus. Ref.1

Tissue specificity

Expressed in heart, skeletal muscle and lymphoblasts (at protein level). Expressed in brain, pancreas, heart, liver, lung, kidney and skeletal muscle. Ref.1

Miscellaneous

Encoded on a bicistronic transcript that encode for two proteins, SNRPN and SNURF. In addition to the primary 1.6-kb bicistronic SNURF-SNRPN transcript, SNURF-only transcript is also detected.

Sequence similarities

Belongs to the SNURF family.

Ontologies

Keywords
   Cellular componentNucleus
Gene Ontology (GO)
   Cellular componentnucleus Ref.1

Non-traceable author statement. Source: UniProtKB

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7171SNRPN upstream reading frame protein
PRO_0000312993

Sequences

Sequence LengthMass (Da)Tools
Q9Y675-1 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: 71FC8B9F247302C9

FASTA718,412
        10         20         30         40         50         60 
MERARDRLHL RRTTEQHVPE VEVQVKRRRT ASLSNQECQL YPRRSQQQQV PVVDFQAELR 

        70 
QAFLAETPRG G 

« Hide

References

« Hide 'large scale' references
[1]"An imprinted, mammalian bicistronic transcript encodes two independent proteins."
Gray T.A., Saitoh S., Nicholls R.D.
Proc. Natl. Acad. Sci. U.S.A. 96:5616-5621(1999) [PubMed: 10318933] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
[2]"Analysis of the DNA sequence and duplication history of human chromosome 15."
Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A. expand/collapse author list , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
Nature 440:671-675(2006) [PubMed: 16572171] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

AF101044 mRNA. Translation: AAD31391.1.
AC124312 Genomic DNA. No translation available.
CH471151 Genomic DNA. Translation: EAW57625.1.
IPIIPI00024246.
RefSeqNP_005669.2.
NP_073715.1.
UniGeneHs.564847

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEQ9Y675.

Genome annotation databases

EnsemblENSG00000214265. Homo sapiens. [Contig view]
GeneID8926.
KEGGhsa:8926.

Organism-specific databases

GeneCardsGC15P022751.
HGNCHGNC:11171. SNURF.
GenAtlasSearch...

Phylogenomic databases

HOVERGENQ9Y675.

Enzyme and pathway databases

Pathway_Interaction_DBar_pathway. Coregulation of Androgen receptor activity.

Gene expression databases

ArrayExpressQ9Y675.

Family and domain databases

InterProIPR009847. SNURF.
[Graphical view]
PANTHERPTHR14508. SNURF. 1 hit.
PfamPF07192. SNURF. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio33560.

Entry information

Entry nameSNURF_HUMAN
AccessionPrimary (citable) accession number: Q9Y675
Secondary accession number(s): A6NCW2
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: November 1, 1999
Last modified: June 16, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome 15

Human chromosome 15: entries, gene names and cross-references to MIM

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents