Reviewed,
UniProtKB/Swiss-Prot Q9Y673 (ALG5_HUMAN)
Last modified
November 24, 2009.
Version 73.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Dolichyl-phosphate beta-glucosyltransferase Short name=DolP-glucosyltransferase EC=2.4.1.117 Alternative name(s): Asparagine-linked glycosylation protein 5 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 324 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Catalytic activity | UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate. |
| Pathway | |
| Subcellular location | Endoplasmic reticulum membrane; Single-pass type II membrane protein By similarity. |
| Tissue specificity | Expressed in pancreas, placenta, liver, heart, brain, kidney, skeletal muscle, and lung. |
| Sequence similarities | Belongs to the glycosyltransferase 2 family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Endoplasmic reticulum Membrane |
| Domain | Signal-anchor Transmembrane |
| Molecular function | Glycosyltransferase Transferase |
| PTM | Glycoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | protein amino acid glycosylation Ref.1 Traceable author statement. Source: ProtInc |
| Cellular component | endoplasmic reticulum Inferred from electronic annotation. Source: UniProtKB-KW integral to membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | dolichyl-phosphate beta-glucosyltransferase activity Inferred from electronic annotation. Source: EC oligosaccharyl transferase activity Ref.1Traceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 324 | 324 | Dolichyl-phosphate beta-glucosyltransferase | PRO_0000059098 | |||||
Regions | |||||||||
| Topological domain | 1 – 7 | 7 | Cytoplasmic Potential | ||||||
| Transmembrane | 8 – 28 | 21 | Signal-anchor for type II membrane protein Potential | ||||||
| Topological domain | 29 – 324 | 296 | Lumenal Potential | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 281 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "A mutation in the human ortholog of the Saccharomyces cerevisiae ALG6 gene causes carbohydrate-deficient glycoprotein syndrome type-Ic." Imbach T., Burda P., Kuhnert P., Wevers R.A., Aebi M., Berger E.G., Hennet T. Proc. Natl. Acad. Sci. U.S.A. 96:6982-6987(1999) [PubMed: 10359825] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells." Zhang Q.-H., Ye M., Wu X.-Y., Ren S.-X., Zhao M., Zhao C.-J., Fu G., Shen Y., Fan H.-Y., Lu G., Zhong M., Xu X.-R., Han Z.-G., Zhang J.-W., Tao J., Huang Q.-H., Zhou J., Hu G.-X. Chen Z.Genome Res. 10:1546-1560(2000) [PubMed: 11042152] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Umbilical cord blood. |
| [3] | "The DNA sequence and analysis of human chromosome 13." Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. Ross M.T.Nature 428:522-528(2004) [PubMed: 15057823] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Prostate. |
| [6] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
Cross-references
Sequence databases | |
|---|---|
| AF102850 mRNA. Translation: AAD41465.1. AF161498 mRNA. Translation: AAF29113.1. AL138706 Genomic DNA. Translation: CAI14011.1. CH471075 Genomic DNA. Translation: EAX08578.1. BC012531 mRNA. Translation: AAH12531.1. | |
| IPI | IPI00002506. |
| PIR | T51776. |
| RefSeq | NP_037470.1. |
| UniGene | Hs.507769 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9Y673. |
Protein family/group databases | |
| CAZy | GT2. Glycosyltransferase Family 2. |
Proteomic databases | |
| PRIDE | Q9Y673. |
Genome annotation databases | |
| Ensembl | ENST00000239891; ENSP00000239891; ENSG00000120697; Homo sapiens. [Genome view] |
| GeneID | 29880. |
| UCSC | uc001uvy.1. human. |
Organism-specific databases | |
| CTD | 29880. |
| GeneCards | GC13M036421. |
| H-InvDB | HIX0011241. HIX0064021. |
| HGNC | HGNC:20266. ALG5. |
| HPA | HPA007989. |
| MIM | 604565. gene. |
| PharmGKB | PA134977026. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q9Y673. |
| HOVERGEN | Q9Y673. |
| OMA | GAVRMGV |
| OrthoDB | EOG94XN2S |
Enzyme and pathway databases | |
| BRENDA | 2.4.1.117. 247. |
Gene expression databases | |
| ArrayExpress | Q9Y673. |
| Bgee | Q9Y673. |
| CleanEx | HS_ALG5. |
| Genevestigator | Q9Y673. |
| GermOnline | ENSG00000120697. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001173. Glyco_trans_2. [Graphical view] |
| Pfam | PF00535. Glycos_transf_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 52401. |
| SOURCE | Search... |
Entry information
| Entry name | ALG5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9Y673 Secondary accession number(s): Q5TBA6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 13 Human chromosome 13: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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