Q9Y616 (IRAK3_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 110.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Interleukin-1 receptor-associated kinase 3 Short name=IRAK-3 EC=2.7.11.1 Alternative name(s): IL-1 receptor-associated kinase M Short name=IRAK-M | ||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 596 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Inhibits dissociation of IRAK1 and IRAK4 from the Toll-like receptor signaling complex by either inhibiting the phosphorylation of IRAK1 and IRAK4 or stabilizing the receptor complex By similarity. Ref.1 UniProtKB Q8K4B2 |
| Catalytic activity | ATP + a protein = ADP + a phosphoprotein. Ref.1 |
| Cofactor | Magnesium. Ref.1 |
| Tissue specificity | Expressed predominantly in peripheral blood lymphocytes. Ref.1 |
| Involvement in disease | Asthma-related traits 5 (ASRT5) [MIM:611064]: Asthma-related traits include clinical symptoms of asthma, such as coughing, wheezing, dyspnea, bronchial hyperresponsiveness as assessed by methacholine challenge test, serum IgE levels, atopy and atopic dermatitis. |
| Sequence similarities | Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. Pelle subfamily. Contains 1 death domain. Contains 1 protein kinase domain. |
| Caution | Ser-293 is present instead of the conserved Asp which is expected to be an active site residue. Low level autophosphorylation activity has been reported in Ref.1, while other authors describe this as an inactive kinase. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| IRAK1 | P51617 | 3 | EBI-447690,EBI-358664 | |
| IRAK2 | O43187 | 3 | EBI-447690,EBI-447733 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9Y616-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9Y616-2) The sequence of this isoform differs from the canonical sequence as follows: 45-105: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 596 | 596 | Interleukin-1 receptor-associated kinase 3 | PRO_0000086033 | |||||
Regions | |||||||||
| Domain | 41 – 106 | 66 | Death | ||||||
| Domain | 165 – 452 | 288 | Protein kinase | ||||||
| Nucleotide binding | 171 – 179 | 9 | ATP By similarity UniProtKB P51617 | ||||||
| Nucleotide binding | 295 – 298 | 4 | ATP By similarity | ||||||
Sites | |||||||||
| Binding site | 192 | 1 | ATP By similarity UniProtKB P51617 | ||||||
| Binding site | 311 | 1 | ATP By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 467 | 1 | Phosphoserine Ref.6 | ||||||
Natural variations | |||||||||
| Alternative sequence | 45 – 105 | 61 | Missing in isoform 2. | VSP_041020 | |||||
| Natural variant | 22 | 1 | P → L May be associated with ASRT5. Ref.5 | VAR_035212 | |||||
| Natural variant | 57 | 1 | H → R. Ref.7 Corresponds to variant rs35239505 [ dbSNP | Ensembl ]. | VAR_040581 | |||||
| Natural variant | 84 | 1 | G → S. Ref.7 Corresponds to variant rs34443407 [ dbSNP | Ensembl ]. | VAR_040582 | |||||
| Natural variant | 111 | 1 | P → A May be associated with ASRT5. Ref.5 | VAR_035213 | |||||
| Natural variant | 134 | 1 | V → M May be associated with ASRT5. Ref.5 | VAR_035214 | |||||
| Natural variant | 147 | 1 | I → V. Ref.1 Ref.2 Ref.4 Ref.7 Corresponds to variant rs1152888 [ dbSNP | Ensembl ]. | VAR_019812 | |||||
| Natural variant | 171 | 1 | I → V. Ref.7 Corresponds to variant rs34682166 [ dbSNP | Ensembl ]. | VAR_040583 | |||||
| Natural variant | 269 | 1 | G → S. Corresponds to variant rs35823766 [ dbSNP | Ensembl ]. | VAR_033901 | |||||
| Natural variant | 270 | 1 | I → V. Corresponds to variant rs11465972 [ dbSNP | Ensembl ]. | VAR_031077 | |||||
| Natural variant | 288 | 1 | S → L. Ref.7 Corresponds to variant rs35574245 [ dbSNP | Ensembl ]. | VAR_040584 | |||||
| Natural variant | 384 | 1 | R → Q. Ref.7 Corresponds to variant rs34272472 [ dbSNP | Ensembl ]. | VAR_040585 | |||||
| Natural variant | 391 | 1 | M → T. Ref.7 Corresponds to variant rs35737689 [ dbSNP | Ensembl ]. | VAR_040586 | |||||
| Natural variant | 400 | 1 | L → V May be associated with ASRT5. Ref.5 | VAR_035215 | |||||
| Natural variant | 429 | 1 | R → Q May be associated with ASRT5. Ref.5 | VAR_035216 | |||||
| Natural variant | 482 | 1 | D → N. Ref.7 Corresponds to variant rs35756811 [ dbSNP | Ensembl ]. | VAR_040587 | |||||
Experimental info | |||||||||
| Sequence conflict | 560 | 1 | N → D in BAG60819. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "IRAK-M is a novel member of the Pelle/interleukin-1 receptor-associated kinase (IRAK) family." Wesche H., Gao X., Li X., Kirschning C.J., Stark G.R., Cao Z. J. Biol. Chem. 274:19403-19410(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, COFACTOR, TISSUE SPECIFICITY, VARIANT VAL-147. Tissue: Peripheral blood lymphocyte. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT VAL-147. |
| [3] | "The finished DNA sequence of human chromosome 12." Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. Gibbs R.A.Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT VAL-147. Tissue: Placenta. |
| [5] | "IRAK-M is involved in the pathogenesis of early-onset persistent asthma." Balaci L., Spada M.C., Olla N., Sole G., Loddo L., Anedda F., Naitza S., Zuncheddu M.A., Maschio A., Altea D., Uda M., Pilia S., Sanna S., Masala M., Crisponi L., Fattori M., Devoto M., Doratiotto S. Pilia G.Am. J. Hum. Genet. 80:1103-1114(2007) [PubMed] [Europe PMC] [Abstract] Cited for: INVOLVEMENT IN ASRT5, VARIANTS LEU-22; ALA-111; MET-134; VAL-400 AND GLN-429. |
| [6] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-467, MASS SPECTROMETRY. |
| [7] | "Patterns of somatic mutation in human cancer genomes." Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G. Stratton M.R.Nature 446:153-158(2007) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS [LARGE SCALE ANALYSIS] ARG-57; SER-84; VAL-147; VAL-171; LEU-288; GLN-384; THR-391 AND ASN-482. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF113136 mRNA. Translation: AAD40879.1. AK298645 mRNA. Translation: BAG60819.1. AC078889 Genomic DNA. No translation available. AC078927 Genomic DNA. No translation available. BC057800 mRNA. Translation: AAH57800.1. BC069388 mRNA. Translation: AAH69388.1. |
| IPI | IPI00026984. IPI00909153. |
| RefSeq | NP_001135995.1. NM_001142523.1. NP_009130.2. NM_007199.2. |
| UniGene | Hs.369265. |
3D structure databases | |
| ProteinModelPortal | Q9Y616. |
| SMR | Q9Y616. Positions 134-449. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9Y616. 17 interactions. |
| MINT | MINT-97148. |
| STRING | 9606.ENSP00000261233. |
PTM databases | |
| PhosphoSite | Q9Y616. |
Polymorphism databases | |
| DMDM | 55584013. |
Proteomic databases | |
| PaxDb | Q9Y616. |
| PRIDE | Q9Y616. |
Protocols and materials databases | |
| DNASU | 11213. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000261233; ENSP00000261233; ENSG00000090376. ENST00000457197; ENSP00000409852; ENSG00000090376. |
| GeneID | 11213. |
| KEGG | hsa:11213. |
| UCSC | uc001sth.3. human. uc010ssy.2. human. |
Organism-specific databases | |
| CTD | 11213. |
| GeneCards | GC12P066582. |
| HGNC | HGNC:17020. IRAK3. |
| HPA | HPA043097. |
| MIM | 604459. gene. 611064. phenotype. |
| neXtProt | NX_Q9Y616. |
| PharmGKB | PA38431. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0515. |
| HOGENOM | HOG000060319. |
| HOVERGEN | HBG052146. |
| InParanoid | Q9Y616. |
| KO | K04732. |
| OMA | CSVICGS. |
| OrthoDB | EOG4Z8XW1. |
| PhylomeDB | Q9Y616. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | il1pathway. IL1-mediated signaling events. |
Gene expression databases | |
| ArrayExpress | Q9Y616. |
| Bgee | Q9Y616. |
| CleanEx | HS_IRAK3. |
| Genevestigator | Q9Y616. |
| GermOnline | ENSG00000090376. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.10.533.10. 1 hit. |
| InterPro | IPR011029. DEATH-like_dom. IPR000488. Death_domain. IPR011009. Kinase-like_dom. IPR000719. Prot_kinase_cat_dom. [Graphical view] |
| Pfam | PF00531. Death. 1 hit. PF00069. Pkinase. 1 hit. [Graphical view] |
| SMART | SM00005. DEATH. 1 hit. [Graphical view] |
| SUPFAM | SSF47986. DEATH_like. 1 hit. SSF56112. Kinase_like. 1 hit. |
| PROSITE | PS50017. DEATH_DOMAIN. 1 hit. PS00107. PROTEIN_KINASE_ATP. False negative. PS50011. PROTEIN_KINASE_DOM. 1 hit. PS00108. PROTEIN_KINASE_ST. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | Q9Y616. |
| ChEMBL | CHEMBL5081. |
| GenomeRNAi | 11213. |
| NextBio | 42675. |
| SOURCE | Search... |
Entry information
| Entry name | IRAK3_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9Y616 Secondary accession number(s): B4DQ57 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human and mouse protein kinases Human and mouse protein kinases: classification and index |
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
