Q9Y490 (TLN1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 135.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Talin-1 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2541 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Probably involved in connections of major cytoskeletal structures to the plasma membrane. High molecular weight cytoskeletal protein concentrated at regions of cell-substratum contact and, in lymphocytes, at cell-cell contacts By similarity. |
| Subunit structure | Binds with high affinity to VCL and with low affinity to integrins. Interacts with APBB1IP; this inhibits VCL binding. Interacts with PTK2/FAK1 By similarity. Interacts with PIP5K1C and NRAP. Interacts with LAYN. Interacts with SYNM. Ref.9 Ref.10 Ref.12 |
| Subcellular location | Cell projection › ruffle membrane; Peripheral membrane protein; Cytoplasmic side By similarity. Cytoplasm › cytoskeleton By similarity. Note: Colocalizes with LAYN at the membrane ruffles By similarity. |
| Sequence similarities | Contains 1 FERM domain. Contains 1 I/LWEQ domain. |
| Sequence caution | The sequence BAA82979.2 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||
Molecule processing | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2541 | 2541 | Talin-1 | PRO_0000219428 | |||||||||
Regions | |||||||||||||
| Domain | 86 – 403 | 318 | FERM | ||||||||||
| Domain | 2293 – 2533 | 241 | I/LWEQ | ||||||||||
| Region | 280 – 435 | 156 | Interaction with LAYN By similarity | ||||||||||
| Region | 1327 – 1948 | 622 | Interaction with SYNM | ||||||||||
Amino acid modifications | |||||||||||||
| Modified residue | 425 | 1 | Phosphoserine Ref.14 Ref.15 Ref.17 | ||||||||||
| Modified residue | 1116 | 1 | Phosphotyrosine By similarity | ||||||||||
| Modified residue | 2031 | 1 | N6-acetyllysine Ref.16 | ||||||||||
| Modified residue | 2040 | 1 | Phosphoserine Ref.19 | ||||||||||
| Modified residue | 2115 | 1 | N6-acetyllysine Ref.16 | ||||||||||
| Modified residue | 2273 | 1 | Phosphoserine By similarity | ||||||||||
Natural variations | |||||||||||||
| Natural variant | 1227 | 1 | S → L. Ref.1 Corresponds to variant rs2295795 [ dbSNP | Ensembl ]. | VAR_023751 | |||||||||
| Natural variant | 1919 | 1 | R → W. Ref.7 Corresponds to variant rs17854239 [ dbSNP | Ensembl ]. | VAR_023752 | |||||||||
| Natural variant | 1984 | 1 | A → T. Corresponds to variant rs35642290 [ dbSNP | Ensembl ]. | VAR_055538 | |||||||||
Experimental info | |||||||||||||
| Sequence conflict | 824 | 1 | R → G in AAD13152. Ref.1 | ||||||||||
| Sequence conflict | 824 | 1 | R → G in AAF23322. Ref.2 | ||||||||||
| Sequence conflict | 1549 | 1 | A → P in AAD13152. Ref.1 | ||||||||||
| Sequence conflict | 1549 | 1 | A → P in AAF23322. Ref.2 | ||||||||||
| Sequence conflict | 1604 | 1 | K → Q in AAD13152. Ref.1 | ||||||||||
| Sequence conflict | 1604 | 1 | K → Q in AAF23322. Ref.2 | ||||||||||
| Sequence conflict | 1701 | 1 | Q → E in AAD13152. Ref.1 | ||||||||||
| Sequence conflict | 1701 | 1 | Q → E in AAF23322. Ref.2 | ||||||||||
| Sequence conflict | 1718 | 1 | N → H in AAD13152. Ref.1 | ||||||||||
| Sequence conflict | 1718 | 1 | N → H in AAF23322. Ref.2 | ||||||||||
| Sequence conflict | 1966 | 1 | A → R in AAD13152. Ref.1 | ||||||||||
| Sequence conflict | 2256 | 1 | Missing in AAF27330. Ref.2 | ||||||||||
Secondary structure | |||||||||||||
Helix Strand Turn | |||||||||||||
| Helix | 608 – 625 | 18 | |||||||||||
| Helix | 2079 – 2098 | 20 | |||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete cDNA sequence of human talin." Mao L., Fan Y.H. Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT LEU-1227. |
| [2] | "Characterization of the human talin (TLN) gene: genomic structure, chromosomal localization, and expression pattern." Ben-Yosef T., Francomano C.A. Genomics 62:316-319(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA]. |
| [3] | "Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Kikuno R., Nagase T., Ishikawa K., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 6:197-205(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [4] | "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones." Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T. DNA Res. 9:99-106(2002) [PubMed] [Europe PMC] [Abstract] Cited for: SEQUENCE REVISION. |
| [5] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT TRP-1919. Tissue: Embryonic carcinoma. |
| [8] | Bienvenut W.V., Claeys D. Submitted (NOV-2005) to UniProtKB Cited for: PROTEIN SEQUENCE OF 8-15; 34-82; 99-106; 119-131; 138-146; 148-156; 165-178; 182-194; 197-234; 257-268; 307-316; 344-358; 428-438; 442-454; 593-634; 674-685; 722-741; 766-824; 828-854; 862-869; 876-910; 923-943; 958-999; 1026-1035; 1076-1086; 1097-1122; 1130-1184; 1191-1198; 1208-1214; 1223-1269; 1274-1306; 1321-1340; 1362-1368; 1402-1431; 1531-1541; 1560-1646; 1674-1780; 1863-1917; 1961-1973; 2007-2016; 2025-2057; 2064-2085; 2090-2099; 2105-2115; 2120-2130; 2134-2141; 2145-2154; 2169-2177; 2198-2209; 2221-2233; 2267-2274; 2276-2321; 2322-2329; 2334-2361; 2369-2398; 2430-2443; 2456-2472; 2477-2491; 2494-2510 AND 2512-2519, MASS SPECTROMETRY. Tissue: Platelet. |
| [9] | "Molecular interactions of N-RAP, a nebulin-related protein of striated muscle myotendon junctions and intercalated disks." Luo G., Herrera A.H., Horowits R. Biochemistry 38:6135-6143(1999) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH NRAP. |
| [10] | "Type I gamma phosphatidylinositol phosphate kinase targets and regulates focal adhesions." Ling K., Doughman R.L., Firestone A.J., Bunce M.W., Anderson R.A. Nature 420:89-93(2002) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH PIP5K1C. |
| [11] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [12] | "Identification of a repeated domain within mammalian alpha-synemin that interacts directly with talin." Sun N., Critchley D.R., Paulin D., Li Z., Robson R.M. Exp. Cell Res. 314:1839-1849(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH SYNM. |
| [13] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Platelet. |
| [14] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-425, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [15] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-425, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [16] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-2031 AND LYS-2115, MASS SPECTROMETRY. |
| [17] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-425, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [18] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [19] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-2040, MASS SPECTROMETRY. |
| [20] | "Structural basis for amplifying vinculin activation by talin." Izard T., Vonrhein C. J. Biol. Chem. 279:27667-27678(2004) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.42 ANGSTROMS) OF 607-631 IN COMPLEX WITH VCL. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF078828 mRNA. Translation: AAD13152.1. AF177198 mRNA. Translation: AAF23322.1. AF178534, AF178081 Genomic DNA. Translation: AAF27330.1. AB028950 mRNA. Translation: BAA82979.2. Different initiation. AL133410 Genomic DNA. No translation available. CH471071 Genomic DNA. Translation: EAW58352.1. BC042923 mRNA. Translation: AAH42923.1. | ||||||||||||||||||
| IPI | IPI00298994. | ||||||||||||||||||
| RefSeq | NP_006280.3. NM_006289.3. | ||||||||||||||||||
| UniGene | Hs.471014. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q9Y490. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | Q9Y490. 3 interactions. | ||||||||||||||||||
| MINT | MINT-5002070. | ||||||||||||||||||
| STRING | 9606.ENSP00000316029. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q9Y490. | ||||||||||||||||||
Polymorphism databases | |||||||||||||||||||
| DMDM | 81175200. | ||||||||||||||||||
2D gel databases | |||||||||||||||||||
| OGP | Q9Y490. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | Q9Y490. | ||||||||||||||||||
| PRIDE | Q9Y490. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000314888; ENSP00000316029; ENSG00000137076. | ||||||||||||||||||
| GeneID | 7094. | ||||||||||||||||||
| KEGG | hsa:7094. | ||||||||||||||||||
| UCSC | uc003zxt.2. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 7094. | ||||||||||||||||||
| GeneCards | GC09M035687. | ||||||||||||||||||
| HGNC | HGNC:11845. TLN1. | ||||||||||||||||||
| HPA | CAB002006. HPA004748. | ||||||||||||||||||
| MIM | 186745. gene. | ||||||||||||||||||
| neXtProt | NX_Q9Y490. | ||||||||||||||||||
| PharmGKB | PA36547. | ||||||||||||||||||
| HUGE | Search... | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | NOG324465. | ||||||||||||||||||
| HOGENOM | HOG000006734. | ||||||||||||||||||
| HOVERGEN | HBG023870. | ||||||||||||||||||
| InParanoid | Q9Y490. | ||||||||||||||||||
| KO | K06271. | ||||||||||||||||||
| OMA | ELGHGCA. | ||||||||||||||||||
| OrthoDB | EOG48PMJ8. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| Pathway_Interaction_DB | amb2_neutrophils_pathway. amb2 Integrin signaling. avb3_integrin_pathway. Integrins in angiogenesis. a4b1_paxdep_pathway. Paxillin-dependent events mediated by a4b1. | ||||||||||||||||||
| Reactome | REACT_111045. Developmental Biology. REACT_111102. Signal Transduction. REACT_116125. Disease. REACT_17044. Muscle contraction. REACT_604. Hemostasis. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | Q9Y490. | ||||||||||||||||||
| Bgee | Q9Y490. | ||||||||||||||||||
| CleanEx | HS_TLN1. | ||||||||||||||||||
| Genevestigator | Q9Y490. | ||||||||||||||||||
| GermOnline | ENSG00000137076. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 1.20.1420.10. 1 hit. 1.20.80.10. 1 hit. 2.30.29.30. 1 hit. | ||||||||||||||||||
| InterPro | IPR019749. Band_41_domain. IPR014352. FERM/acyl-CoA-bd_prot_3-hlx. IPR019748. FERM_central. IPR019747. FERM_CS. IPR000299. FERM_domain. IPR018979. FERM_N. IPR002558. ILWEQ_dom. IPR002404. Insln_rcpt_S1. IPR011993. PH_like_dom. IPR015710. Talin-1. IPR015224. Talin_cent. IPR015009. Vinculin-bd_dom. IPR006077. Vinculin/catenin. [Graphical view] | ||||||||||||||||||
| PANTHER | PTHR19981:SF7. PTHR19981:SF7. 1 hit. | ||||||||||||||||||
| Pfam | PF00373. FERM_M. 1 hit. PF09379. FERM_N. 1 hit. PF01608. I_LWEQ. 1 hit. PF02174. IRS. 1 hit. PF09141. Talin_middle. 1 hit. PF08913. VBS. 2 hits. [Graphical view] | ||||||||||||||||||
| ProDom | PD011820. ILWEQ. 1 hit. [Graphical view] [Entries sharing at least one domain] | ||||||||||||||||||
| SMART | SM00295. B41. 1 hit. SM00307. ILWEQ. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF47031. FERM_3-hlx. 1 hit. SSF109880. Talin_cent. 1 hit. SSF47220. Vinculin/catenin. 6 hits. | ||||||||||||||||||
| PROSITE | PS00660. FERM_1. 1 hit. PS00661. FERM_2. 1 hit. PS50057. FERM_3. 1 hit. PS50945. I_LWEQ. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| ChiTaRS | TLN1. human. | ||||||||||||||||||
| EvolutionaryTrace | Q9Y490. | ||||||||||||||||||
| GenomeRNAi | 7094. | ||||||||||||||||||
| NextBio | 27751. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | TLN1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9Y490 Secondary accession number(s): A6NMY0 Q9UPX3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
